| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0392 |
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| Symbol | |
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| ID | 5537854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 494483 |
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| End bp | 495436 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892555 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001430542 |
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| Protein GI | 156740413 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0885433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCCGC TAATGCCGCT TCCAGTCCCC GACGAGATCG TCGGAGACCT GGCAAAAGTC
GAACAGGTTA TTCACGCGCG CATGCAAGGG CGACCGATCG TCGCTCAGAC TGCAAGCGCT
GCATTGCGCG GCATGGAAAA GCCGTATTTG CGCGCTGCAC TGGTTGTGCT TGCAGCCCGT
CTCGGTCGCT ACGACGCGCG CCGCGTTATT CACGCTGCGG CAGCGGCGGA ACTGATCCAT
TTTGCCACTG CCGTCCACGA CAATCTGATC AACGAGGCAG CGCGCCGACG CGGACAACCA
ATCGGTGATC AGCGTTGGAA CGGCGATGTG GCGCTGATGT CGGGCGATTA TCTGCTGGCG
CTCGCCGCTT CCGAAATGGC GCTCGCGCCC GATGCGCGCA TTATCAGTAT GTATTCGCGC
GTTGTGATGA CCTTCTGCGA GGGCCGGTTG GCGCCGGTGA CGGCGGTTGC GCCGCTCGAT
CAGGCGCTGG CGCAGCACGA GTATGTCGTC GAAAGCCGGA CTGCCGCGCT CTTCGAGACG
GCGGCGCGGG TCGGCGTTGT GTGCGGCGGC AGCGATGATA CGCTGTCCAA TACGCTGGGA
CGCTTCGGCA GAGAACTTGG TATGGCAATG CACATTGCCG CCGAAGTGCG CGATTATGAA
ATTGATGGAC CTTATGCGGG ACACGACCTG CGCGCGGGCC GGATTACCCT GCCGCTGATC
TATGCGGTCG ATGCCGGGGG AGGGGCTGAT CTGGCAGCGG TCGTCGATCA GCACGCGCCC
GACACACACT ACCTGACTGC TGCCATCGAT CAGGTGCGTC GCCTCGGTGT TCCGCCGGCG
CGCGCCAGAA TGCGCGATCA TGCGCAACGG GCGATGGATG CGCTGGCATT CGTCCCGCCG
GGCGACATTC GCAATGCGCT CGGTGCGCTT GCCGACCGGG TCTCCCATAT GTAA
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| Protein sequence | MMPLMPLPVP DEIVGDLAKV EQVIHARMQG RPIVAQTASA ALRGMEKPYL RAALVVLAAR
LGRYDARRVI HAAAAAELIH FATAVHDNLI NEAARRRGQP IGDQRWNGDV ALMSGDYLLA
LAASEMALAP DARIISMYSR VVMTFCEGRL APVTAVAPLD QALAQHEYVV ESRTAALFET
AARVGVVCGG SDDTLSNTLG RFGRELGMAM HIAAEVRDYE IDGPYAGHDL RAGRITLPLI
YAVDAGGGAD LAAVVDQHAP DTHYLTAAID QVRRLGVPPA RARMRDHAQR AMDALAFVPP
GDIRNALGAL ADRVSHM
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