Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0278 |
Symbol | |
ID | 5537740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 345122 |
End bp | 345454 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640892442 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001430429 |
Protein GI | 156740300 |
COG category | [K] Transcription |
COG ID | [COG1476] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.111983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAG AACAGAACAG GCGCCGCCGC CGGGCGACGT ATGTCTGGAA GCCTGAAATG ATTCGCGCGT TGCGAGAACA TATGGACCTG ACTCAACGCG AACTGGCAGA TCTGCTGGAG GTGCGGCAGC AGACGATCAG CGAATGGGAA ACCGGTCTGC ATACGCCGCA TCGCTCGACC CAGAAAACGT TGAGCATGGT GGCTGAGCGC GCCGGTTTTC CGTATCTGCC CCAAACCGCC GAAACGCCCG CTGATGGCGA TGGTGCACAG CACAATGGCG AGGCGCCTGC CGAGCGCGTC GATGCCGGCG GGGCAGGCGC CAACAGCGAT TGA
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Protein sequence | MSTEQNRRRR RATYVWKPEM IRALREHMDL TQRELADLLE VRQQTISEWE TGLHTPHRST QKTLSMVAER AGFPYLPQTA ETPADGDGAQ HNGEAPAERV DAGGAGANSD
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