Gene Rcas_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0278 
Symbol 
ID5537740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp345122 
End bp345454 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content62% 
IMG OID640892442 
ProductXRE family transcriptional regulator 
Protein accessionYP_001430429 
Protein GI156740300 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.111983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAG AACAGAACAG GCGCCGCCGC CGGGCGACGT ATGTCTGGAA GCCTGAAATG 
ATTCGCGCGT TGCGAGAACA TATGGACCTG ACTCAACGCG AACTGGCAGA TCTGCTGGAG
GTGCGGCAGC AGACGATCAG CGAATGGGAA ACCGGTCTGC ATACGCCGCA TCGCTCGACC
CAGAAAACGT TGAGCATGGT GGCTGAGCGC GCCGGTTTTC CGTATCTGCC CCAAACCGCC
GAAACGCCCG CTGATGGCGA TGGTGCACAG CACAATGGCG AGGCGCCTGC CGAGCGCGTC
GATGCCGGCG GGGCAGGCGC CAACAGCGAT TGA
 
Protein sequence
MSTEQNRRRR RATYVWKPEM IRALREHMDL TQRELADLLE VRQQTISEWE TGLHTPHRST 
QKTLSMVAER AGFPYLPQTA ETPADGDGAQ HNGEAPAERV DAGGAGANSD