Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0180 |
Symbol | |
ID | 5537641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 217090 |
End bp | 217428 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640892344 |
Product | hypothetical protein |
Protein accession | YP_001430332 |
Protein GI | 156740203 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.44807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGATG CGACAACAGC CTGGGTGACG GCAATCGGCG GTGCGCTCAT GGCGGCGCTG GCGGCGCTGT TGCCCTGGTT TCGCCTGCGA CTCGGCGGGA AGCCCTGGGA TGAGGTTTTC AGCAATCCGC GACTGCGCCG GATCGCGCGC ATTCAAGAGC GGTTGGCACA GGGGTCGCTA GGGGCGATGG GTGCAGGATT CCTCGTTTCC GGCGCCGGTG TGTTACTGAA CCTTCCTCCC GTTCCGGCGC AACTTGTCGT CTCGATCTGC TACGGATTGG CGCTTGCCGG GTTGGTGGCG CAGGTGGCGC TTATCATTCG CTCGCGCCGG ATTGAGTGA
|
Protein sequence | MADATTAWVT AIGGALMAAL AALLPWFRLR LGGKPWDEVF SNPRLRRIAR IQERLAQGSL GAMGAGFLVS GAGVLLNLPP VPAQLVVSIC YGLALAGLVA QVALIIRSRR IE
|
| |