Gene Rcas_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0180 
Symbol 
ID5537641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp217090 
End bp217428 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content65% 
IMG OID640892344 
Producthypothetical protein 
Protein accessionYP_001430332 
Protein GI156740203 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.44807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATG CGACAACAGC CTGGGTGACG GCAATCGGCG GTGCGCTCAT GGCGGCGCTG 
GCGGCGCTGT TGCCCTGGTT TCGCCTGCGA CTCGGCGGGA AGCCCTGGGA TGAGGTTTTC
AGCAATCCGC GACTGCGCCG GATCGCGCGC ATTCAAGAGC GGTTGGCACA GGGGTCGCTA
GGGGCGATGG GTGCAGGATT CCTCGTTTCC GGCGCCGGTG TGTTACTGAA CCTTCCTCCC
GTTCCGGCGC AACTTGTCGT CTCGATCTGC TACGGATTGG CGCTTGCCGG GTTGGTGGCG
CAGGTGGCGC TTATCATTCG CTCGCGCCGG ATTGAGTGA
 
Protein sequence
MADATTAWVT AIGGALMAAL AALLPWFRLR LGGKPWDEVF SNPRLRRIAR IQERLAQGSL 
GAMGAGFLVS GAGVLLNLPP VPAQLVVSIC YGLALAGLVA QVALIIRSRR IE