Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0140 |
Symbol | |
ID | 5537600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 168816 |
End bp | 169763 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640892304 |
Product | hypothetical protein |
Protein accession | YP_001430293 |
Protein GI | 156740164 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.89303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGCG TAGCCTTGAC CCCACGTGTA CGCCTGATCG TGCATCGTCT CTGGGAGGTG CTACGATCAC GCCGATGGCA GTGGACCCTG GGAGTGATCT TTTTCCTGGC AATCAATGGC TATATCGGCT ACCGTCTCTA TCAGGATCGC GAGCAAATTG CGCAATTGAG CAATATTCGG ATTGAATCTG TGTGGTTGGT CATTGCCTTT GGCGTGCAGA CAGCCGGTAT GCTCAATGCC GTAGACGCCT GGAGTACGAT ATTCCGCCAT CTTGGTTATA ACCTGCCGCT ACGCATCCAC TTTCGCATCT ACGCCCTCTC GAATCTGGCC GCACGACTAC CCGGAATAGG TGTTACTGCC GCGAGTCGGG CATTCCTGTA CGGGCAACGC GGTGTCGATG GGATACAGGT TGCTGCCATT GCGCTGATGG AGCCGCCGGT TTTCGGAGTC GCAGCGATCG TCGTTGCACT GGCAATGCTG GCATTCCCAG GGAGTATTGG CAGCTTTGTG AACCCCTGGG TTCTGATTGG GGCGTTCGGC ATTACGCTTA TCATTCTTCC ATCGCCGCTT TTTCGCCGTC TGCTTGACTG GTTGATTGCG CGTCATCCCG GGTCTGCAAC GTTACAATGG CAACATGTGC TTATTTGGGC GGGGCGAAAT ATACTCACGA TCGTCCTGGG AGGCATCGCA CTCTACTGCG TATGCCGCGC TGCCAGCGCC ATTCCCGAGT CGGCGCTGGC GCTTCTGATT CAATGCTGGG CGTTGCTGGT GGTTGCGGGC TCGTTGCTTT TCTGGATACC GGTTGAACTT GGCATCACAA GCAGCATATT GGTGCTTACG CTTGCAATGA TGATGCCGAT GCCGCAGGCG CTCCTGCTGC TGATTGCATG GCGCGTCTGG GGCATGCTGG TTGATCTGGT GTGGGGGACG GCGGGGCTCG CCTTGTAG
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Protein sequence | MESVALTPRV RLIVHRLWEV LRSRRWQWTL GVIFFLAING YIGYRLYQDR EQIAQLSNIR IESVWLVIAF GVQTAGMLNA VDAWSTIFRH LGYNLPLRIH FRIYALSNLA ARLPGIGVTA ASRAFLYGQR GVDGIQVAAI ALMEPPVFGV AAIVVALAML AFPGSIGSFV NPWVLIGAFG ITLIILPSPL FRRLLDWLIA RHPGSATLQW QHVLIWAGRN ILTIVLGGIA LYCVCRAASA IPESALALLI QCWALLVVAG SLLFWIPVEL GITSSILVLT LAMMMPMPQA LLLLIAWRVW GMLVDLVWGT AGLAL
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