Gene RSp1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp1566 
SymbolcoxO 
ID1223878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand+ 
Start bp1969105 
End bp1969713 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content71% 
IMG OID637241429 
Productcytochrome-C oxidase oxidoreductase protein 
Protein accessionNP_523125 
Protein GI17549785 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC TGCCCCGCCG CTTCGTTCCC GGCACGCCGC CCGTGCTGCC CGGCGCGGGA 
CGCATCGGCC TGCGCGTCTT CATGGGCGTG GCGACGACGC TGTTCTCGCT GCTGATCCTG 
GCCTATGCGA TGCGCATGCG CGAAGCGGAT TGGATGCCGG TCCCGCATCC GGTGCTGCTG 
TGGTGGAACA CCGGCGCGCT GGCGCTGGCC AGCGCGGCGA TGCAGATGGC GCGGCAGGCA 
AGCACGCGGC GCGCAACGTG GCTGCTGGCG GGCGGCGCGC TGGCCGCCCT GTTCGTGATC 
GGGCAATGGA CGGCGTGGCA GCAGCTGTCG GCCAGCGGAC AAGGCGTGAC GGTCAACCCG 
TCCAACAGCT TCCTGTATGT GTTCACCGGC CTGCATGCGC TGCATGTGAT CGGCGGCCTC 
ATCGCCTGGA GCATCACCGC CGCGCGCCTG CGCGCCGATC CCGAACGCGC CCGGCGCGCC 
GTCGCCCTGT GCGCAACGTA CTGGCACTTC CTGCTGGCCG TGTGGCTCGT GCTGCTGGCG 
GCGATGTGGT GGATCACACC CGCGTTCGTC GCCGCCATCT GCGGGCCGTT GTATGGAGCC 
ACGCCATGA
 
Protein sequence
MTTLPRRFVP GTPPVLPGAG RIGLRVFMGV ATTLFSLLIL AYAMRMREAD WMPVPHPVLL 
WWNTGALALA SAAMQMARQA STRRATWLLA GGALAALFVI GQWTAWQQLS ASGQGVTVNP 
SNSFLYVFTG LHALHVIGGL IAWSITAARL RADPERARRA VALCATYWHF LLAVWLVLLA 
AMWWITPAFV AAICGPLYGA TP