| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1547 |
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| Symbol | tISRso15 |
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| ID | 1223859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1947872 |
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| End bp | 1949092 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637241410 |
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| Product | ISRSO15-transposase protein |
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| Protein accession | NP_523106 |
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| Protein GI | 17549766 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3464] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.355973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGATC GCAAGACACT GCAAGCGCTG GGCTGCTGGA AGGGTTACCG CCTGGAGCGC
GTGGAGTGGC CGCAAGGCGA GAGCCGCACG CTATCGCTCT ATCTGAAGCC AGTCAGCAAG
GTCATGCACT GTGAGCAATG CGGAACGCGT TGCTCGCAGA TTCATGAGAC GACAGCTCGG
CGGGTACGTG ATCTGCCGCT CTTCGAGTAC CGGGTGGTGC TGCACGTCCC ACGCCGGCGC
GTGTGGTGCG AGCGTTGTGG CGGACCTCGG CTGGAGAAGC TGGACTGGCT GGGCCGCTAC
CAGAGAGTGA CGCAGCGATT CGCCGAGGCC TGCGAGAAGC TGCTGCAGTC GAGCAGCGTA
CAGGCGGTGG CCGCGTTCTA CGATCTGGGC TGGCACACGG TCAAATCGAT CGACAAGATG
CGCTTGCGAG CGCGTGTGGT CGAACCGGAC TGGTCGACGA TCCGTTATCT GGCGATGGAC
GAGTTCGCAC TCCATAAAGG CCATCGCTAT GCCACGGTGG TCGTTGATCC GATCGGCCGG
CAGGTGCTCT GGATCGGGCC GGGGCGCTCG CGCGAGACTG CCCGCGCCTT CTTCGAACAG
CTTCCGGAGG GCGTTGCCCA GCGCATCGAG GCGGTGGCAA TCGACATGAC GACCGCCTAC
GAACTGGAGA TCAACGCGCA TTGCCCGCAG GCCGAGGTGG TCTACGACTT GTTCCACGTC
GTGGCCAAGT ATGGGCGTGA GGTGATCGAC CGGGTGCGGG TGGATCAGGC CAATCAACTC
CGGCATGACA AGCCGGCCCG GAAGGTTCTG AAGTCCAGCC GGTGGCTGTT GCTACGCAAG
CGCCACAATC TGAAGCCAGA GCAGGCCGTG CACCTGAAGG AGCTGCTGGC CGCCAATCAG
TCGCTGTTAT GCGTCTACGT GCTGCGCGAC GAGTTGAAAC GGCTCTGGTT TTACCGCAGA
CCGGCCTGGG CGCAAAAGGC CTGGGAACAA TGGTTTGAGC AGGCTCGGCA AAGCGGGATC
GCCGCTTTGC AACTGTTCGC CCAGCGCCTG GAGGGCTACT GGCATGGAAT TCTGGCCCGC
TGCCGCCACC CGCTCAACAC CAGCGTCGTC GAAGGCATCA ACAACACCAT CAAGGTCATC
AAACGTCGGG CTTACGGGTA CCGCGACGAG GAATACTTCT TCCTCAAGAT CCGCGCCGCG
TTCCCCGGAA TTCCTCGATG A
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| Protein sequence | MLDRKTLQAL GCWKGYRLER VEWPQGESRT LSLYLKPVSK VMHCEQCGTR CSQIHETTAR
RVRDLPLFEY RVVLHVPRRR VWCERCGGPR LEKLDWLGRY QRVTQRFAEA CEKLLQSSSV
QAVAAFYDLG WHTVKSIDKM RLRARVVEPD WSTIRYLAMD EFALHKGHRY ATVVVDPIGR
QVLWIGPGRS RETARAFFEQ LPEGVAQRIE AVAIDMTTAY ELEINAHCPQ AEVVYDLFHV
VAKYGREVID RVRVDQANQL RHDKPARKVL KSSRWLLLRK RHNLKPEQAV HLKELLAANQ
SLLCVYVLRD ELKRLWFYRR PAWAQKAWEQ WFEQARQSGI AALQLFAQRL EGYWHGILAR
CRHPLNTSVV EGINNTIKVI KRRAYGYRDE EYFFLKIRAA FPGIPR
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