| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1300 |
|---|
| Symbol | tISRso13 |
|---|
| ID | 1223612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 1648986 |
|---|
| End bp | 1650320 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637241163 |
|---|
| Product | ISRSO13-transposase protein |
|---|
| Protein accession | NP_522859 |
|---|
| Protein GI | 17549519 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3385] FOG: Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGTC TGGCGCTGGA GCGGGCGTTG CCGGCTACGT GGGTGGACGA GGTATTCGAA
GTGCATCGAA ATCGCCAGTA CCCGCGAGAG CTGATGTTCT CCACCATCGT GGAGCTGATG
ACGTTGGTGA CCCTGGGGCT GCGTCCTTCG TTACATGCGG CCGCGCGCAA GATGGGCAAT
CTGCCGGTGT CAATGGCAGC GCTGTACGAC AAGCTCAACC GCACAGAGCC AGCGATTCTG
CGAGGCTTGG TACGCGGCAG CGCACAGCGT TTGGCGCAGG TGGCGGTGCA CCTGGATGAG
CGCACCAGCC TGCCGGGCTG GCAGTTGCGC ATCGTAGACG GCAACCATCT ACCGGCCAGC
GAGAAGCGGC TGGGGCCGCT ACGCGGCTAT CGTGGCGCCG CGCTGCCTGG GCACAGCTTG
GTGGTCTACG ACCCGGATCT GGGCTTGGTG TGCGATGTGG TGGCCTGCGA GGATGCGTAC
GAAAGCGAGC GAGCCGGCAT GCAGCCCTTG CTCGACAGTG CCCAAGCCGG GCAATTGTGG
ATAGCGGATC GGCACTTCTG CACCCACACC ATCATGCAAG GCTGGAGTCG GGCGGGAGCG
GAATTCATCG TGCGCGAGCA TGCGCGCCAC CCGCGACTAA GCCGGCATGG CTGCTGGAGT
GGGTACAAGC GTATCGACAC GGGCCGCGTG CGCGAGCAGG CCATCGAAGT GCGAGTCGTT
CACGATGACG AGTGCCAAGC CAGGCCGCCA AGTTGGCGCC GCATCGAGAT CGAACTGGAC
ACGCCTACCG AGGCCGGCGA AACCGTGATC GGGCTGTGGA GCAATCTGCC TGCCCAGGTC
GATGCGGCAA CGATCGCTGC GCTGTACCGC AAGCGCTGGC GCATCGAGAG CATGTTCCAG
CGCCTGGAGT CGGTGCTGCA CAGCGAGATC AAGAGTCTGG GGCATCCCCG AGCGGCTTTA
CTGGGCTTCA CGGTGGCGGT GCTGGCCTAT AACGTCGTGT CACTGCTGCA GCGTGCCGTC
GAGCAGGCGC ACCATGAATC GGCGCCGCAG TTGGAGGTCT CCAGCTATCA CCTGGCCGAG
CACATCAAAA GCGGCTATGA GGGCATGCTG ATCGCTTTGC CAGCCGAGCA CTGGCCCAGT
GCGGCCGAAG CGTCTGCGCA GTCGCTGGCT CAAAGGCTGT TGCACTTGGC GCGGCGCATC
TCACCCACGC AAGTGGCCAC GAGCAAACGC GGCCCCAAGA TCGACAAGCC CACGGGCTAT
GTGGACGGCA GCATCGCCCG AGCCCATGTC TGCACTGCCC GCGTACTCAA AAAGGCCCGG
GCGGAAAGAC CTTGA
|
|---|
| Protein sequence | MARLALERAL PATWVDEVFE VHRNRQYPRE LMFSTIVELM TLVTLGLRPS LHAAARKMGN
LPVSMAALYD KLNRTEPAIL RGLVRGSAQR LAQVAVHLDE RTSLPGWQLR IVDGNHLPAS
EKRLGPLRGY RGAALPGHSL VVYDPDLGLV CDVVACEDAY ESERAGMQPL LDSAQAGQLW
IADRHFCTHT IMQGWSRAGA EFIVREHARH PRLSRHGCWS GYKRIDTGRV REQAIEVRVV
HDDECQARPP SWRRIEIELD TPTEAGETVI GLWSNLPAQV DAATIAALYR KRWRIESMFQ
RLESVLHSEI KSLGHPRAAL LGFTVAVLAY NVVSLLQRAV EQAHHESAPQ LEVSSYHLAE
HIKSGYEGML IALPAEHWPS AAEASAQSLA QRLLHLARRI SPTQVATSKR GPKIDKPTGY
VDGSIARAHV CTARVLKKAR AERP
|
|---|
| |