| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0952 |
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| Symbol | tISRso6a |
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| ID | 1223259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1196996 |
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| End bp | 1198060 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637240812 |
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| Product | ISRSO3-transposase ORFA protein |
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| Protein accession | NP_522513 |
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| Protein GI | 17549173 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.273706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.107434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAGCT ACGAGGATTA CATGGAAGTA CAGATTCTGC GTCGCCAGGG CTGCAGTTTG
CGTGCGATCG CAACCGAGAC TGGCATGGCC GTGAACACCA TCAGGAAGTA CCTGGTGTCC
GGCGCGCCCG AGCGCAAGCC ACGCGAGCCG GTGGTGGGCA AGTTGGAGCC GTTCAAGGCC
TTCATACAGT CCCGCGTTGA CGCCGCACGT CCGGACTGGA TTCCGGCGAC GGTGCTGTTG
CGCGAGATCG AGGAGCGTGG GTACACCGGC AAGCTGCGCA TTGTTCAGGA ATACCTGCAA
ACGCTGCGGC CCGCCAGCCG GCCCGATCCG GTTGTGCGGT TCGAGACGGA ACCCGGCCAG
CAAATGCAGA TGGATTGGAT CGAATTCCGC AAGACCGGGC ACAAGCACGG CATGCTGGCG
GCATTCGTTG CCACGTTGGG ATACAGCCGA GCCAGCTATG TCGAGTTCGT TTCCGACATG
CGCCTGGAGA CCTTGCTCAC CTGCCATGTG CGTGCATTCG ATGCCTTTGG CGGAGTCACC
AAGGAGATCC TGTACGACAA CATGAAGACG GTGATCCTGC AGCGCAATGC CTACGGTAAG
CAACAGCATC GGTACCAACC AGGCTTTGCC GACTTCGCCA AGCACTATGG GTTCGCGCCG
CGCGTGTGCA AGCCCTACCG GGCGAAGACG AAGGGCAAAG TCGAGCGGAT GAACGGCTAC
CTGCGCTACA GCTTCTGGGT CCCGTTGGCT TCCAAGCTCA AGCAGATCGG CTTGGCTGCG
GACAAGGATC TGTGCAATCA ACAGGTTGGC CTCTGGCTGC GGGATGTGGC CAATGTCCGC
GTTCACGGCA CGACGAAGCG CGTTCCCGTG GACGTCCTGA GAGAGGAACG ACCGCATCTG
CTGCCAACGC CGGCACTCTA TGCCGGGCGA TCGGTGCGCG CCGGTGCAAC GCCTCACGAG
ACGCCCAAGC CGGCCTCCAG GTTTGCGACG CCGGACTGGC ATGTCTGCTT GCAGCACCCG
CTGTCCGTCT ACGATTCCTT CTGCCAGCAG GGAGTCGCCG CATGA
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| Protein sequence | MISYEDYMEV QILRRQGCSL RAIATETGMA VNTIRKYLVS GAPERKPREP VVGKLEPFKA
FIQSRVDAAR PDWIPATVLL REIEERGYTG KLRIVQEYLQ TLRPASRPDP VVRFETEPGQ
QMQMDWIEFR KTGHKHGMLA AFVATLGYSR ASYVEFVSDM RLETLLTCHV RAFDAFGGVT
KEILYDNMKT VILQRNAYGK QQHRYQPGFA DFAKHYGFAP RVCKPYRAKT KGKVERMNGY
LRYSFWVPLA SKLKQIGLAA DKDLCNQQVG LWLRDVANVR VHGTTKRVPV DVLREERPHL
LPTPALYAGR SVRAGATPHE TPKPASRFAT PDWHVCLQHP LSVYDSFCQQ GVAA
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