| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0862 |
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| Symbol | hpaP |
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| ID | 1223169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1089046 |
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| End bp | 1089639 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637240722 |
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| Product | Hrp associated protein HPAP |
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| Protein accession | NP_522423 |
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| Protein GI | 17549083 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02557] type III secretion protein HpaP |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.024551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCAAG CCGTCCGCCT CTGGCGCCCC CAGCCGGTCG ACCCGGCCCC GCCCACCCGG
CGCCGCACGC CGCTGCGGAC ACCGGGCCCG CATGACGCGC TGCCCTATGT GCCGCCGCCC
CGCCCCGAGC CCCCGGAGCC CGTCGAGGAC GACTTCCCGG AGCCCCGGCA GGACACCCCG
GCCAGCGATC CGCCCCCCGA GGCGCGCACC GACGCCAGCC CACCGCAGCC CGCCGCCGAC
CCCGATGCCT CGCTCCACAC CGCGGCCATC GCCAGCCGCC TGGTGCGGAC CTGCTCGGAG
ATCGGCGCGG GCGAGACCAT GACCGAGCAC CTTGCCCGGC TGCTCTCCCA GTTCTGTGCC
TCGCAGGCGA TCCGCTCCGG CGGCGAATGC TGGGAAATCT CACTCGATCT TGATCCCAAG
ATCCTGCCCG AAACCCGCCT CACGCTGCGG CTTTCGCCGC ACACGCTATC GCTTCGCTTC
GAGGCCGGAC ACCCTCGCTC CCGGCACTTA CTCTCCGAAC ATGGCGACAC GCTGCGTCAG
CGCATCCACG CGCTGCTGCG GCAGCAAGTC GATGTCGAAC TCGAACTCTG GTGA
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| Protein sequence | MTQAVRLWRP QPVDPAPPTR RRTPLRTPGP HDALPYVPPP RPEPPEPVED DFPEPRQDTP
ASDPPPEART DASPPQPAAD PDASLHTAAI ASRLVRTCSE IGAGETMTEH LARLLSQFCA
SQAIRSGGEC WEISLDLDPK ILPETRLTLR LSPHTLSLRF EAGHPRSRHL LSEHGDTLRQ
RIHALLRQQV DVELELW
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