Gene RSp0810 details

Gene Information

• Locus tag: RSp0810
• Symbol: atpC
• ID: 1223117
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: +
• Start bp: 1020699
• End bp: 1021118
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637240670
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: NP_522371
• Protein GI: 17549031
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.116067
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.642417
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCGCTGC TGACCGTGGA CGTCGTGACC GCAGAGGAGC GGCTGTACCA GGGCACCGCC 
AAATTCGTGG TGGTGCCGGG CACGGAGGGC GAACTGGGCA TCCTGCCCGG CCACGAGCCG 
CTGCTGACGC GGCTGCGCCC CGGCACCGTG CGCGTGACGC TGGAGAACGA CGACGAGGTC 
ATCCTCTTCG TCGCTGGTGG TTTCGCGCAC ATCCTGCCGC AGGAGGTGAT CCTGCTGGCC 
GACACGGCGG TGCGCGCCCG CGACCTGGAC GAGGCCAAGG CTCAGCAGGC GCGCAAGGCC 
GCCGAAGAAC TGTTGCAGAA CAGCCGCAGC AAGATCGACT ACGCTCGCGC CCAGGCCGAG 
CTGGCCGAAG CCGTGGCGCA GCTGGCCGCC ATCGAGCGCG CGCGCCGCCG GCGGAGATAG 

 

Protein sequence

MPLLTVDVVT AEERLYQGTA KFVVVPGTEG ELGILPGHEP LLTRLRPGTV RVTLENDDEV 
ILFVAGGFAH ILPQEVILLA DTAVRARDLD EAKAQQARKA AEELLQNSRS KIDYARAQAE 
LAEAVAQLAA IERARRRRR