| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0634 |
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| Symbol | rfaC2 |
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| ID | 1222941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 773208 |
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| End bp | 774206 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240494 |
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| Product | lipopolysaccharide heptosyltransferase protein |
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| Protein accession | NP_522195 |
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| Protein GI | 17548855 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.415835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.68498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAA TCCTGATTGT AAAAATGACA TCGCTCGGCG ACGTGATCCA GACGCTCCCC
GTCGTCACGG ACATCCGCAG GGCATTCCCG GGTGTGGAAG TGGACTGGGC CGTCGATGAA
TCCTGCGCGG ATGTCGTGCG CATGAGCCCG GGCGTCAGCC GCGTGTTGTC CGCGCCGCTG
CGCCGCTTCA AGAAAACGCG CAGCCTGGCC GACCTCAAGG CGATCCTGGC GCTGGCCGCC
GCGTTGCGCC GGTATCGCTA TGACGCCGTG CTCGATCTGC ACGGCGTCTA CAAGAGCGCC
ATCGTTTCGT TCGTCGCCCG CGCGCGCCGG CGTTTCGGCT ACCGCGATCC GGACCTGGGC
GAACGCGGCG CGATGTTCGC GTACAACCGG CGCTTCGGTC CGCGCCCCGC GTGCAACGCC
TGGCACGGCA TGCGCATCAG CGCAGGTGAA GCGCTGGGCT ACATGCCGCA GGGCTTCGCG
GACTACGGCA TCGTGACCGG GCGGGGCGGC GAACGGGCAC AGCCGGGCCA CGCCGTCGGC
GCGCCCTACG CCCTGTTTTT CCATGCGACC TCGAAAGACG ACAAGAAATG GCCCCCTGGG
CATTGGGCCG CGCTGGCCCG CGAGATGCTC GCGGGCGGGC TGCGCGTGCT GTTGCCCTGG
CACGCCACCG CCGAGCTGCG CGAGGCGCTG CGGATCGCCG CCCTGGCGCC CGGCGCCGCG
GTGATGCCGC GCATGTCGCT CGCGGAGCTC ACGCACAAGA TCGAGGGCGC CGCGGCGGTG
GTCGGTGTCG ACACGGGGCT CGTCCACATG GCACACGCGA TGAAGAAGCC GACCGTGATG
ATCTTCCTCG CCACCTCGCG CGACCACTGC GGGATCGCGG CGCCGCGTTC GCTGTCGATC
GGCGAGCAGG GCTGGGTGCC GGGCGTCGAC GATGTGCTGA GCGGGCTGGC GCGCGTCTTT
CCGGAGTTCG GTCCGTCGAA ATCCTCGATC GCTGCGTGA
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| Protein sequence | MKRILIVKMT SLGDVIQTLP VVTDIRRAFP GVEVDWAVDE SCADVVRMSP GVSRVLSAPL
RRFKKTRSLA DLKAILALAA ALRRYRYDAV LDLHGVYKSA IVSFVARARR RFGYRDPDLG
ERGAMFAYNR RFGPRPACNA WHGMRISAGE ALGYMPQGFA DYGIVTGRGG ERAQPGHAVG
APYALFFHAT SKDDKKWPPG HWAALAREML AGGLRVLLPW HATAELREAL RIAALAPGAA
VMPRMSLAEL THKIEGAAAV VGVDTGLVHM AHAMKKPTVM IFLATSRDHC GIAAPRSLSI
GEQGWVPGVD DVLSGLARVF PEFGPSKSSI AA
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