Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0382 |
Symbol | fliC |
ID | 1222689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 486217 |
End bp | 487038 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637240242 |
Product | flagellin protein |
Protein accession | NP_521943 |
Protein GI | 17548603 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.768637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTCA GCCTCAATAC CAACATCTCG TCCCTGCAAA CGCAGCAAGC CCTGTCGCAA TCGCAGTCCG CTCTGCAAAA GTCGCTGCAG CGCCTGTCGA CCGGTCTGCG TGTGAACAGC GCGCAGGATG ATTCTGCGGC CTACGCGGCA TCCAGCAGCC TGACCACGAC CCTGAACTCG CAAACGCAAG GTATTCAGAA CGCCAACGGT GCGAACTCGT ACCTGCAAAC GGCCGACTCG TACCTGGGCC AGGTTGAAAA CAACCTGCAA CGTATGCGCC AACTGGCTGT GGAATCCAAC AACGGCGGTC TGTCGGCAGC CGACCAGACC AACCTGGACA AGGAATACCA ACAGCTGGCA ACGGCCAACA AGAACATCGA AACCAACGCC AACTACAACG GCAACAAGCT GTTTGACGGC TCGGTGGCTT CGACGACCTT CCAATATGGC CAGAACGCAG CCACGGACGT GACCACGGTC ACCAACGTCA ACATGTCGAC CTTCGGCACG CTGACCGGCA CGAGCGTGAC CAGCGCTGCC AACGCGACCG CAGCCCAGGC CGCGATCGAT ACCGACCTGA CCTCCCTGAA GGCCGCCCGC GCCAGCCTGG GTGCGCAGCA GTCGGGTCTG GCGTCGACCA TCAACACGCT GACGTCGAAC AACACGGCCC TGTCGGCCGC CAAGTCGACG CTGATCGATA CCGACTACGC TTCTGAAACG TCGAACATGA CCCGCCAGAA CATCCTGCAG CAAGCGGGTA CCGCCATGCT GGCGCAGGCC AACTCGGCAC CCAACAGCAT TCTGAACCTG CTGAAGGGCT AA
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Protein sequence | MSLSLNTNIS SLQTQQALSQ SQSALQKSLQ RLSTGLRVNS AQDDSAAYAA SSSLTTTLNS QTQGIQNANG ANSYLQTADS YLGQVENNLQ RMRQLAVESN NGGLSAADQT NLDKEYQQLA TANKNIETNA NYNGNKLFDG SVASTTFQYG QNAATDVTTV TNVNMSTFGT LTGTSVTSAA NATAAQAAID TDLTSLKAAR ASLGAQQSGL ASTINTLTSN NTALSAAKST LIDTDYASET SNMTRQNILQ QAGTAMLAQA NSAPNSILNL LKG
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