Gene RSp0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0378 
SymbolfliM 
ID1222685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp481466 
End bp482473 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content63% 
IMG OID637240238 
Productflagellar motor switch protein FliM 
Protein accessionNP_521939 
Protein GI17548599 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGG AAGAGTTTCT TTCCCAGGAG GAGATCGACG CGCTCCTCAA GGGCGTCACC 
AACGAGGTCG ACGAGGAACC GGCCGAGGCC GAAGCGGCGA GTGTACGCAC TTACAACCTG
GGCTCGCAGG AGCGCATCGT CCGTGGGCGC ATGCCCACGC TGGAGATCAT CAACGAGCGG
TTCGCGCGCA ACTGGCGCAT GGGCCTGTTC AACTTCCTGC GGCGCAACGC GGAGATCTCC
GTCGGGCCGG TGAAGGTCCA GAAGTACAGC GAATTCATCC GCAACCTGGT GGTGCCGGCC
GCCATCAACC TGGTGCACGT CAAGCCGCTG CGCGGCACGG CGCTGTTCGT GTTCGACCCG
AACCTGATCT TCATCGTGGT CGACCACCTG TTCGGCGGCG ACGGCCGCTT CCACATGCGC
GTGGAGGGCC GCGATTTCAC CCAGGTGGAG CAGCGCATCA TCCAGCGCAT GCTTCAGCTG
ATGTTCGAGC ACTACGGCAA GGCCTGGCAG CCGATCTACC CGATCGAGTT CGAGCCCCTG
CGCATGGAAA TGCACACGGA ATTCGCCAAC GTGGCCACCC CCAACGAGGT GGTGGTCTCG
ACGCGCTTCA GCATGGAGCT CGGCAGCAAC GGCGGCGACG TGCATGTCTG CATGCCGTAC
ACCATGATCG AGCCGATCCG CGATCTGCTC ACCAGCGCCA TCCAGGGCGA AGCGCTGGAA
GTGGACAAGC GCTGGGTGCG GCTGCTGTCG CAGCAGGTGC AGACCGCCGA GGTGGAGGTG
GTGGCGCATC TGGCCAACGC CAACGTGCAT GTGTCCGACA TCCTCAACAT GAAGGTGGGC
GATGTGGTCC CGATCGAGCT GGACGACAGC GTCACCGCCA GGGTGGACGG CGTGCCCGTC
ATGGAATGCG CGTACGGCAC CTTCAACGGC CAATACGCGC TGCGCGTCAA CCGCATGCTG
AACATGAATG GCAGCGAACC TGCCCCGGAG CCAGAAAATG ACAAGTGA
 
Protein sequence
MLKEEFLSQE EIDALLKGVT NEVDEEPAEA EAASVRTYNL GSQERIVRGR MPTLEIINER 
FARNWRMGLF NFLRRNAEIS VGPVKVQKYS EFIRNLVVPA AINLVHVKPL RGTALFVFDP
NLIFIVVDHL FGGDGRFHMR VEGRDFTQVE QRIIQRMLQL MFEHYGKAWQ PIYPIEFEPL
RMEMHTEFAN VATPNEVVVS TRFSMELGSN GGDVHVCMPY TMIEPIRDLL TSAIQGEALE
VDKRWVRLLS QQVQTAEVEV VAHLANANVH VSDILNMKVG DVVPIELDDS VTARVDGVPV
MECAYGTFNG QYALRVNRML NMNGSEPAPE PENDK