Gene RSp0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0358 
SymbolfabF2 
ID1222665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp463634 
End bp464860 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content67% 
IMG OID637240218 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionNP_521919 
Protein GI17548579 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTG TGGTCGTGAC CGGAATGGGC GGCGTGACTG CCCTGGGCTC CCAATGGGGC 
GACATCCAGC AAGCCTTGCA GCGAGGGCGC AACGCGGTGC GCCGCATGCC CGAATGGGAT
GTCTTCAGCG CGCTGCATTC ACGGCTCGCC TGCCCGCTCC CCGCGTTTGA GGTGCCGGCG
ACGTATCCGC GCAAGAAGAC GCGTTCGATG GGCCCCGTCT CGATGTACGC GGTCCGCGCC
ACCGAACTGG CGCTGGCGGA TGCGGGACTG GCCGATGACC CCAGCATCAG CGATGGGCGC
ATGGGCGTGG CCTATGGATC CTCGTCCGGG TCGGTGCAGC CGATCCGGGC ATTCGGCACG
ATGCTCGATA CCGGCTCGAT GCAGGGGATC ACGTCCAACA GTTACATCCA GATGATGCCG
CACACGACAG CTGTCAACGT GGCGCTGTTC TGGGACCTGA AAGGCCGCAT CGTGCCGACC
TCCTGCGCTT GCGCATCGGG CAGCCAGGCG ATCGGGTACG CCTACGAGGC GATCGCCGGC
GGCAAGCAGA CGCTGATGCT CGCGGGTGGC GCGGAAGAAT TGTCCGGCCC GGCCGTGGCC
GTGTTCGATA CGCTGTACGC GACCAGCACG CGCAATGACG CGCCTCACCT GACGCCGCGC
CCGTTCGATG CCGCCCGCGA CGGCCTGGTG GTTGGCGAGG GTGCGGCCAC GCTGGTCCTC
GAGGAATACG AACACGCCCG TGCCCGCGGC GCCGTCATCC ATGCCGAGAT CGTCGGCTTC
GGCTGCAACT CCGACGGCGC CCACATGACC CAGCCCACCG CGGCCACGAT GAGCCACGCC
ATGCGGCTCG CGCTGCAGGA TGCGGGGCTG CCGCAGGATG CCATCGGATA CGTCAACGCC
CACGGCACCT CCACGGACCT CGGCGACGTG GCGGAGAGCC GTGCGACGGC CGAAGTCTTC
CGGCCCACCT TGCCGATCAG CTCGCTCAAG AGCTACATCG GCCATACGCT GGGCGCGTGC
GGCGCCATCG AAGCCTGGTG GACCATCGAA ATGATGAAAC GCAACTGGTA TGCGCCGACC
CTCAATCTGG AGACCGTCGA CCCGGCTTGC GCCCCGCTCG ACTACATCGC AGGCAACGCA
CGCGCCATCG ACACCGAGTA CGTGATGACC AACAACTTTG CGTTCGGCGG CATCAATACC
TCCCTCGTCC TCAAGCGCGC GCCGTGA
 
Protein sequence
MKRVVVTGMG GVTALGSQWG DIQQALQRGR NAVRRMPEWD VFSALHSRLA CPLPAFEVPA 
TYPRKKTRSM GPVSMYAVRA TELALADAGL ADDPSISDGR MGVAYGSSSG SVQPIRAFGT
MLDTGSMQGI TSNSYIQMMP HTTAVNVALF WDLKGRIVPT SCACASGSQA IGYAYEAIAG
GKQTLMLAGG AEELSGPAVA VFDTLYATST RNDAPHLTPR PFDAARDGLV VGEGAATLVL
EEYEHARARG AVIHAEIVGF GCNSDGAHMT QPTAATMSHA MRLALQDAGL PQDAIGYVNA
HGTSTDLGDV AESRATAEVF RPTLPISSLK SYIGHTLGAC GAIEAWWTIE MMKRNWYAPT
LNLETVDPAC APLDYIAGNA RAIDTEYVMT NNFAFGGINT SLVLKRAP