Gene RSp0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0357 
SymbolfabB 
ID1222664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp462366 
End bp463580 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content68% 
IMG OID637240217 
Product3-oxoacyl-[acyl-carrier-protein] synthase I 
Protein accessionNP_521918 
Protein GI17548578 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.21868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.707111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCACGG GCATGGGCAT CGTGTCCTGC CTCGGCAATA CCCTCGATGC GGTTGCCGCT 
GCGTTGCGCG AAGGCCGCTC GGGCCTGTCG GCCGTCAGTG CGTGGCACGC GCTCGGACTC
GCGAGCCAGG TGGCGGGCGT GGCTTGCGTC GCGGATGAGG CACCGTTCCC CCGCAAGTTC
GAGCGGTTCA TGGGTGACAC CGCACGCTTG GCCTGTCACG CGGCCCGCAA GGCCGTCGAA
GACGCGGCAC TCGATCCAGC CCTCTTGCAA TCGCCTCGCG TCGGCGCCGT GGTGGGTTCG
GGAAGCGGAG CCCTGTCCGC CTACGATGCG GCACTGGCCA TCTCGCGCTC ACGCGGCGTG
GACCGCGTGC CGCCCTATGT CGTTCCGCAG GCGATGAGCA GCACGGTGTC CGCCAATCTT
GCGCAGGTCT TCGGCATCGG CGGCATCAGC TATTCGCCGT CGTCCGCGTG CACCACATCG
GCGCTGGCCA TCGGGCAGGC CGCGCACTGG ATCCGCTCCG GGCAGCAGGA CATCGTTCTG
GCGGGCGGTG CCGAAGAGCT GCATGACAAC TACGCGCTGC TCTTCGATGC CATGGGCGCC
CTGTCGCGTG CCAGCGCGGA CACGCCGCAT CTGGCCTCCC GGCCTTACGA CACGGCCCGC
GACGGCTTTG TCCTGGCGTC GGGGGCAGGC GTGCTGGTCC TCGAGTCGCT CACGCATGCC
CGCGCGCGCG GTGCGCGCAT CTACGCGGAG GTCATCGGTT TCGGCCAAAG CACGGACAGC
TCGTCGATGG TGTCGCCACA GGCAGCCAGC ATCGCCCGCG CCATCCGCGA CACGCTGCGA
CACACAGAGG CACCGCCCGA CTACATCAAC ACGCATGGGC CGTCGACCCC GTCCGGCGAC
CTCGAGGAGC TCCGCGCGCT CAAGGCTGTA TTCGGCCCGA ACACACCGGC GTTCTCCTCT
ACCAAGGGAC TGACCGGGCA TCCACCCGGT GCGGCGGGTG CCCACGAAGC CATCTACACG
CTGCTGATGA TGCGCGACGG GTTCATTGCC GGCTGCCCGA ATATCGTGAC GCTCGAATCG
GAGGCCACGG CCATGCCCCT GGTCCGCCGC TCGCGCCCGG CCGACCTTCG TACCACCATG
TCCATTTCTT TCGGGTTCGG CGGCAGTTGT GCCGGCCTGA TGTTCGGCGC CGATCCCGGC
GATTTCTACT CATAA
 
Protein sequence
MVTGMGIVSC LGNTLDAVAA ALREGRSGLS AVSAWHALGL ASQVAGVACV ADEAPFPRKF 
ERFMGDTARL ACHAARKAVE DAALDPALLQ SPRVGAVVGS GSGALSAYDA ALAISRSRGV
DRVPPYVVPQ AMSSTVSANL AQVFGIGGIS YSPSSACTTS ALAIGQAAHW IRSGQQDIVL
AGGAEELHDN YALLFDAMGA LSRASADTPH LASRPYDTAR DGFVLASGAG VLVLESLTHA
RARGARIYAE VIGFGQSTDS SSMVSPQAAS IARAIRDTLR HTEAPPDYIN THGPSTPSGD
LEELRALKAV FGPNTPAFSS TKGLTGHPPG AAGAHEAIYT LLMMRDGFIA GCPNIVTLES
EATAMPLVRR SRPADLRTTM SISFGFGGSC AGLMFGADPG DFYS