| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0286 |
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| Symbol | hmsH |
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| ID | 1222418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 369885 |
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| End bp | 372335 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637240146 |
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| Product | putative hemin-binding outer membrane transmembrane protein |
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| Protein accession | NP_521847 |
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| Protein GI | 17548507 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0121559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.150632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTTC CCGTGCCTGT CCCCCCGCTC ATGCGCACCG GCCGCCCTGA TCCGGCCGGC
CCGCGCGATT CCCGCCGATG CGCCGTCGCT GCCGCGACGG TGGTGCTGGT CGGCGCCGCG
CCGCTGGCCG CGCATGCCGC GCGCCCGTCC GCCGGCAGCC AGGACGATGC CGCCAGTGCC
GCCACGCGGC GCCTGATCGA TGCCGAGCTC GCCGAGCTGA ACGACGGCAC CGCCGCCCCG
GCCGCCGCCA TCGCGCCGTC CGATGCCGGC GGCTTGCCCG CATCGCCCGC GCGGACCCTG
CTGGTGGCCC AGCAGACGGT GCCGGCCGCC GCGCCGCCGC AGCCTGCCCA GGTGCCCACG
CCGGCCCCGG CCACGGAGAT GGCGCCTGCG AGCCCGCCGG AGGAAGCGAG TCCGCCGTCG
CCCACGGTGA TCCTGCCGCC GGGCGCGCCG CCGCCGGCAC CTGCGGCGGT TGCGCCGGCA
GGGCCGTCGT TGCAGGGCCC GGCGCCGGGG GCGCTGACGC CGCTGCCGAC GGCGCCAGCG
GTGCCCGGCG CCGAGGCTGC CGGCCCGCCG CAGCCCACGC CCACCGCCCC GATGCCGACC
GCGCGCGACG CGTATCGCGC CGAGGTGCTG CGCGAATCCC GCGAAGGCGC GCCCACGCTG
GCGCTGGATC ATCTGCGCGA GCACCCCGAC TGGTTCACCG ACAGCGAGTC CTGGCAGGTG
GAGCATGCCG CGGCGGCCCA GCGCATCCGC TGGGGCCGTC AGCAGCTCAA GTCGCTGAGC
GGGCCGGAGC GCTTCGTCAT CATCGACCAG GCCGTCGCGC AGACCGAGGC GCTGCTCAAG
AAGGTGCCCG AGACGCCGGA GAACGCCGCC TTCCGCCAGG AGATCGTCGC CGACGAAGTG
GTGGCGCTGG CCTCGCGCGG GCGCATGAAG GATGCCGTGC AGCGCTACGA GGCGATGTCG
CAGGCGGGCA AGGTGCCGGC CTACACGCGC GTGTCGGCGG GCGACGCCTA TTCGTATCTC
GAGAAGCCCG ACCGCGCGGC CGCTGCCTAC GCGCAGGCCC TGAAGGACGC CGGCCCCGGC
GAGATCGAGA CCGGCGACGT GCAGGAGGGC CTGTTCTACG CCGATCTCGA TACCGGCCGC
TATGAAGAGG CGCGCGCGCT GCTCGACAAG ATGAAGGCCG ACAACCCCGA GTACGTGCGG
CTGGCGCCCG AGGCCGGCAC GCCCAATCCC GACTATTCGC GCGTCAAGCG GCTCGAAGCG
CAATACCTGG TGCTGACCGG CCGCACGCAC GAGGGCATCG CCGCGCTCGA CAAATGGCGG
CACGAAGCGC CGTTCGCGGC CTCGTTCGTG AGCGCGCGCG CCGACGGCGC CATGGTGCAG
GCCGAGCCGT ACACGGCGCG CGCCATGTAC AAGGCCGCGC TGTCCGAGCA CCCCGACGAC
CTGAGCGTGA TGTCGGGCTA CGGCCGCGCC TCGCTGGCGC TGGATGACCT GAAGACGGCC
AAGGACGTGG CCGACGGGCT GGACGAGCGC TTCCCCGAGA ACGGCTCGGT GCACGCGCTG
CGCAAGGACC TCGACGTCTA CCAGAGCCCG CAGCTCATCA TCGAGGCCAC CGGCGACAAG
GGCAACGCGG TGTTCGCCGA CCAGGAATTC GGCGTCAACA CCCGGGCCTA TTCCGGTCCG
TTCGCCGATC ACTACCGGCT GTTCGTGCAC AACTTCACCG GCCGCGCGGA CTTCCAGGGC
GCGTCGCAGA GCCGCGTGCG CAACGGCGCC GGCGTGCAGT GGTTCGACAC CGGCATCGAG
GTGAACGGCG AGGTGCACCA GTCGGTCGGC GCGGCCGGCA AGACCGGCGG CACGCTGGAC
GCGGCGTGGA TACCGTCCGA CCACTGGAAG GTCTCCGGCC TGATCACCAA CGATGACCTG
GAGGTGCCCT ACAAGGCGTA CGCGGCCGGC GTGACCGGCA AGACCGCCAC CGGCAACGTG
CGCTACACCT GGGACGAGAC GCGCTACGCG TCGCTGACGT ACGGCCTGTC GCGCTACACC
GACCACAACC TGCGCCAGCG CTGGGATGCC GGCTTCTACC AGCAGGTGTT CTCGTCGCCG
CGGCATACGG TGGGCGTGCT GTTCGGCGCC GGCACCAGCA GCAGCACGAT GAACAACGTG
AGCTACTTCA GCCCCTCGCG CGACTACAGC GGGCAGGCCA CCGCGATCTG GTCATGGACG
CCCTGGCGCT ACGCCGACAA GTCGTTCACC CAGCGCGTCT ACCTGACCGG CGGGGTCTAC
AACCAGCAGT CGTTCGGCAC GAGCCCGATG CTCGAGGCGC GGCTGGAGCA CGTCTGGCAG
ATCAACCGCA AGACCCAGGT CTCCTACGGC GTGGGCCTGG GCCGGCACCG CTACGACGGC
CAGCCCGAGA CCCGCAAGTT CATCTACCTG AATCTCAACA TTCCGCTGTG A
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| Protein sequence | MTVPVPVPPL MRTGRPDPAG PRDSRRCAVA AATVVLVGAA PLAAHAARPS AGSQDDAASA
ATRRLIDAEL AELNDGTAAP AAAIAPSDAG GLPASPARTL LVAQQTVPAA APPQPAQVPT
PAPATEMAPA SPPEEASPPS PTVILPPGAP PPAPAAVAPA GPSLQGPAPG ALTPLPTAPA
VPGAEAAGPP QPTPTAPMPT ARDAYRAEVL RESREGAPTL ALDHLREHPD WFTDSESWQV
EHAAAAQRIR WGRQQLKSLS GPERFVIIDQ AVAQTEALLK KVPETPENAA FRQEIVADEV
VALASRGRMK DAVQRYEAMS QAGKVPAYTR VSAGDAYSYL EKPDRAAAAY AQALKDAGPG
EIETGDVQEG LFYADLDTGR YEEARALLDK MKADNPEYVR LAPEAGTPNP DYSRVKRLEA
QYLVLTGRTH EGIAALDKWR HEAPFAASFV SARADGAMVQ AEPYTARAMY KAALSEHPDD
LSVMSGYGRA SLALDDLKTA KDVADGLDER FPENGSVHAL RKDLDVYQSP QLIIEATGDK
GNAVFADQEF GVNTRAYSGP FADHYRLFVH NFTGRADFQG ASQSRVRNGA GVQWFDTGIE
VNGEVHQSVG AAGKTGGTLD AAWIPSDHWK VSGLITNDDL EVPYKAYAAG VTGKTATGNV
RYTWDETRYA SLTYGLSRYT DHNLRQRWDA GFYQQVFSSP RHTVGVLFGA GTSSSTMNNV
SYFSPSRDYS GQATAIWSWT PWRYADKSFT QRVYLTGGVY NQQSFGTSPM LEARLEHVWQ
INRKTQVSYG VGLGRHRYDG QPETRKFIYL NLNIPL
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