| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3407 |
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| Symbol | |
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| ID | 1222271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3683472 |
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| End bp | 3684779 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637239824 |
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| Product | putative oxidoreductase protein |
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| Protein accession | NP_521526 |
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| Protein GI | 17548124 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC CGTCGCCCGA CATCGTGCCC GACGGCGAGC CGCTGCCGCC CTCGCTGTGG
GCCGCGACGG CGCCGGCCGC GCCGCCCACG CCGGCCCTGC GGGAATCGAT CGCCACCGAT
GTGCTGGTCA TCGGCGGCGG CTACACGGGG CTATCGACCG CGCTGCACCT GGCCGAACGC
GGCACGGGCG TGACGGTGCT GGAAGCCAAC GACCCGGGCT GGGGCGCCTC CGGGCGCAAC
GGCGGGCAGG TCAACCCGAC GCTCAAGCAC GACCCGGACG AACTGGTGCG CATGCTGGGC
GCCGCGCGCG CCGAGCCGCT GATCGATGCG GTGTCGCGCT CGGCCGATCT GGTGTTTGAC
CTGATCGGCC GGCACGGCAT CGACTGCCAG CCGGTGCGCG CGGGCTGGCT GCAGCTGTCG
TATTCAGACA AGGCGGTGCC GGCCATGCAT GCGCGGGCGC ACCAGTGGGC GCGGCGCGGG
GTGCGGGTCG AGCTGCTGGA CCGGGCCGCG GTGGCGCGCC GCGTGGGCAC CGAGGCGTTC
GCCGGCGGCT GGCTGGACGG CCGGGCGGGC GCCATCCAGC CGCTGGCCTA TGCGCGCGGC
CTGGTGCACG CCGCACAACG AGCGGGCGCC GCCGTGCACG GCAACACGGC CGTCACCGCC
CTGGAGCGGC AGGGCACGGC ATGGATCGCA TCCACCCGCA CCGGCGCGCA GGTCCGTGCC
CAGCACGTCG TCATCGCCAC CAACGGCTAC ACCGGTGCGC TGTGGCCGGG GCTGGCACAG
ACCGTGCTCA GTGCCAACAG CTTTATCGTC GCGACGCGGC CGCTGAAGCC GGCGGATGCG
CAGGCCATCC TGGCGCGCGG CGAAACGGCG TCCACCTCGC AACGGCTGCT GCTGTATTTC
CGCAAGGACG CGGCCGGGCG CCTGCTGATG GGTGGTCGCG GCTTCTTTGC CGAGCCGCGC
GGTCCGCAGG ATTTCGCACA CCTCGAACGC TCACTGGAGC TGCTGTTTCC GCAGTTGGGC
CGGCTCGACT ACGCATACCG GTGGGCCGGC CGCATCGCCA TCACGCGGGA CTTCATGCCG
CACATCCACG AGCCCGCGCC GGGCGTGACG ATGGCGCTGG GCTGCAACGG ACGCGGCATC
GCGCTGTGCA CCAGTCTGGG CCAGCAGATC GCGGCGCGGC TGGCGGACAG CGGCCATGCG
TTCCCGTACC CGGTGTCGCC CATCGTGCCG ATTCCGCTGC ACGGCCTGCA GCGCTTCTAC
ATCGCCGCCG GGGTGGCGTG GTACAGCCTG CTGGACAAGC TTGGCTGA
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| Protein sequence | MTMPSPDIVP DGEPLPPSLW AATAPAAPPT PALRESIATD VLVIGGGYTG LSTALHLAER
GTGVTVLEAN DPGWGASGRN GGQVNPTLKH DPDELVRMLG AARAEPLIDA VSRSADLVFD
LIGRHGIDCQ PVRAGWLQLS YSDKAVPAMH ARAHQWARRG VRVELLDRAA VARRVGTEAF
AGGWLDGRAG AIQPLAYARG LVHAAQRAGA AVHGNTAVTA LERQGTAWIA STRTGAQVRA
QHVVIATNGY TGALWPGLAQ TVLSANSFIV ATRPLKPADA QAILARGETA STSQRLLLYF
RKDAAGRLLM GGRGFFAEPR GPQDFAHLER SLELLFPQLG RLDYAYRWAG RIAITRDFMP
HIHEPAPGVT MALGCNGRGI ALCTSLGQQI AARLADSGHA FPYPVSPIVP IPLHGLQRFY
IAAGVAWYSL LDKLG
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