| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3405 |
|---|
| Symbol | |
|---|
| ID | 1222269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 3681731 |
|---|
| End bp | 3682516 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637239822 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_521524 |
|---|
| Protein GI | 17548122 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4705] Uncharacterized membrane-anchored protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCG CATCACAGAC GCACGACCCC GTCGACATCG CCCGCAGCAA GCTGCCCGAG
ATCACGCTGG CGTTCTGGAT CATGAAGATC TGCGCCACCA CGCTGGGCGA GACCGCCGGC
GACCTGCTGT CGATGACGCT CAAGATCGGC TACGCGGCCA GTTCGGTGCT GCTGGTCGGC
CTCTTCCTGG TGACGCTGGG CGCGCAGTTG CGCAGCCGTG CCTACCATCC GCTGCTGTAC
TGGACGGTGA TCCTCTCGAC CAGCACGGCC GGCACCACGC TGTCGGACTT CATGGACCGC
ACGCTCGGCC TCGGCTATGC GACCGGGTCG GCCATCCTCG CCGGCCTGCT CGGCGCGGTG
CTGCTCTACT GGAAGCTGAG CCGCAAGTCG CTATCGATCG CGCGGGTGCG GGGCGGCCAG
GGCGAGCTGC TGTACTGGGG CGCCATCCTC GTCTCCAACA CGCTGGGCAC GGCGCTGGGC
GACTTCCTGG CCGATTCGTC GGGGCTGGGC TTTGCCGGTG GGGCGCTGCT GATCGCCGGC
ATCATCGCGC TGATCGCGGC GGCGTATTAT TTCACCGGCC TGTCGCGGGT GGCGCTGTTC
TGGATGGCCT TTGTGCTGAC GCGCCCGCTG GGGGCCACCG CGGGCGACCT GCTGACCAAG
CCCGTGAGCG CGGGCGGCCT GAACCTGGGC ACGGCCGGCG CATCGCTGGT GCTGCTGGCG
GTCTTGCTGG CCACCGTCGG CCATGCGAGC TGGCAGGCGC GGCGCGTGAG CCTGCGGTCG
GCGTAG
|
|---|
| Protein sequence | MNTASQTHDP VDIARSKLPE ITLAFWIMKI CATTLGETAG DLLSMTLKIG YAASSVLLVG
LFLVTLGAQL RSRAYHPLLY WTVILSTSTA GTTLSDFMDR TLGLGYATGS AILAGLLGAV
LLYWKLSRKS LSIARVRGGQ GELLYWGAIL VSNTLGTALG DFLADSSGLG FAGGALLIAG
IIALIAAAYY FTGLSRVALF WMAFVLTRPL GATAGDLLTK PVSAGGLNLG TAGASLVLLA
VLLATVGHAS WQARRVSLRS A
|
|---|
| |