| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3387 |
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| Symbol | |
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| ID | 1222251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3652131 |
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| End bp | 3653342 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637239804 |
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| Product | two-component response regulator transcription regulator protein |
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| Protein accession | NP_521506 |
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| Protein GI | 17548104 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00386008 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGGTT TCGCGCAGCT CGCGGTACTG GTGGTCGACG GTCAGCTTGG GCAGCGTACC
GCTGCCAGGC AGGTGCTGCA GACCCTGGGT GTGCAGCAGA TCCTGGCCGC CGGTGACGGA
CGCGAGGCGC TGGACCTGCT GCACTTGTGC CAGTTCGACC TGGTGCTGTG CGACATCGCC
ATGCCGGGGA TGGACGGCTC GGCGCTGATG CAACGGATGC GGTTGCACGA CGGTCGCCCG
CCCGCGCGGC AGGCGCCGGT CTGGGCGTGG GTCGGCACGC AGGAAGGACC GCTGCTCGAA
TCGCATATCG GCCTGACCGA AGCCATGGGG CTGGCGCAGG CGCATGGCCT GTGCGGGCCG
CTGCGCCCCG AGCATGTGCT GCCGTTGCTG TACGAAGCGG CCACGCGCGA CGGTGAAGTT
ACGCCGCTGA GCGCGGTCCG GCCGCCGGCC TTCTCGGACG ATGAGCTTGC CGCCCTGGTG
CACGATACGC CCGGGCAGAT CGAAGTGGTG CTGCAGCCTC AGCATGATCT CGTCACGGAT
CGCGTGGTTG GCGCGGAGGC CCTGTGCCGA TGGCTGCATC CCGTCCATGG CCGTGTCTTG
CCGACAGCCT TCGTGCCGCG CCTGGAAGCG CTGGGCCTGG CCGACGCGCT GTTCTTCCAT
GTGCTTGGGC ACTGCGCGCG CGTCCAGCGT GCCCTGGCGG CGCAGTCCAT CGCGCTGCCC
ATCGGCGTGA ATGCCTCGGC ACAGACCCTG AGTCGCGAGG GTGCCATCGA TCGCATCGCC
ACCGCGATGC GCGACGCGGC CATCGACCCC GCGCGCATCG TCATTGAGCT GAGCGACGAG
GCACCGGTGG CGGAGACGGC CCGGCTCGCG GTGGCGCTGC ACCGCCTGCG GCAATTCGGC
CATGGCCTGG CGATCGACGA TTTCGGCGTG GGGTTTGCCG TGCTCAAGCT GCTGGCCGAT
CTGCCCTTCA CCATCCTCAA GATCGACCGC GCGTTGACCG AGGCGGTCAG TCTGTCCAGC
CAGCGCGGCA TCGTCTGCCG CACGATGATC GAACTGGCCG GCGCGCTGAG GCTCCAGTGC
GTGGCCGAAG GCGTGGAGAC CGATGCGCAG CGGCGGGCCC TGCTCGCGCT GGGGTGTGCC
ACCGGCCAGG GGTACCTGTG GGCCGCACCG CTGTCGACGA CGGCGTTCCT GGCGCGGGTG
CAGGCCGATT GA
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| Protein sequence | MEGFAQLAVL VVDGQLGQRT AARQVLQTLG VQQILAAGDG REALDLLHLC QFDLVLCDIA
MPGMDGSALM QRMRLHDGRP PARQAPVWAW VGTQEGPLLE SHIGLTEAMG LAQAHGLCGP
LRPEHVLPLL YEAATRDGEV TPLSAVRPPA FSDDELAALV HDTPGQIEVV LQPQHDLVTD
RVVGAEALCR WLHPVHGRVL PTAFVPRLEA LGLADALFFH VLGHCARVQR ALAAQSIALP
IGVNASAQTL SREGAIDRIA TAMRDAAIDP ARIVIELSDE APVAETARLA VALHRLRQFG
HGLAIDDFGV GFAVLKLLAD LPFTILKIDR ALTEAVSLSS QRGIVCRTMI ELAGALRLQC
VAEGVETDAQ RRALLALGCA TGQGYLWAAP LSTTAFLARV QAD
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