| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3302 |
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| Symbol | priA |
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| ID | 1222166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3562909 |
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| End bp | 3565215 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637239719 |
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| Product | primosome assembly protein PriA |
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| Protein accession | NP_521421 |
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| Protein GI | 17548019 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.304002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTA CCCGTGTTGA TGCCGCTCCG CCCGCCGTTG CCCAGGCAGC GCGCGCGGGC
GCCATTGCGC GGGTGGTGAT CGATACGCCG CTGGATGCCG TATTCGACTA TCGCTGCGCG
CAGCCGGTCG TGCCGGGCCA GCTGGTGGTG GTGCCGTTCG GCAGCCGGCG CGTGGTGGCG
CTGGTGGTGG AGAGCGCCGG CACCACCGAG GTGCCGGCAG ACCGCCTGCG CGATGTCGAG
CGCGTGCTCG ACTGGGTGCC GCCGCTGGAT GCCGAATGGC GCGCGCTGGC CGAATTCGCC
GCGGGCTACT ACCACCGGGC GCTGGGTGAA GTGACGCTGC CGGCGCTGCC GCCGTTGTGG
CGTACGCCCG GCAGCTGGGA CAGCCTGGCC CGCCATGCCA CCGAGACCGT CTACGTGATG
CGCGAGCCGG CGCGCGCCGC CTTGCTCGAC AGCATCCCCC GGCGGGCGGC CGGGGCGATG
CGCCTGGCCG AAGCGCTGAC GGGCGACGGC GAACTGTCCG CCAGCGCCGC TGTCGCGCTG
CACGGGCAGG CGACGGCCAA GCTGCGCGAT TGGGCCGCGG TGGGCTGGGT CGGGGCGGAA
CTGCGTCCCA GGCCGTTGCT GCCGGTGCCG CGCGATCTGC CGCCGGCGTC CGTCGCGCCG
GCGCTCAATG CCGAGCAGGC TGCTGCCGTC GAGGCCATCG CGCAGGCCGG GGCGGGCGGC
GGTTTCGCGC CGTTCCTGCT GTACGGGGTC ACCGGCAGCG GCAAGACCGA GGTCTACCTG
CACGCCATCG CCGATGCCCT CGCGCGCGAT CCGGCCGCGC AGGTGCTGAT GCTGGTGCCC
GAGATCAACC TGACGCCGCA GCTGGAGGCG CGCATTGCGG CGCGCTTCCC CGGCGTGCCG
CTGGCCGCGC TGCACAGCGG CCTGGCCGAG CAGCCGCGCG CGCTGAACTG GCTGGCGGCG
CATCGCGGCG AGGCGCGCAT CGTGCTCGGC ACGCGGCTGG CGATGCTGGC CTCGCTGCCG
CACCTCGCGC TGATCCTCGT CGACGAGGAG CACGACACGT CCTATAAGCA GCAAGAGGGC
CTGCGCTATT CCGCGCGCGA TCTGGCGCTG TGGCGGGCCA AGCAGCGCGG CATCCCGGTC
GTGCTCGGGT CGGCCACGCC GTCGCTGGAG ACCTGGTGGC GCGCCGAGCA GGGCACCACC
GCGCGCCTGG TGCTGTCGCA GCGCGCGCAG GCCGATGCGG TGCTGCCGCG CGTCTCGCTG
ATCGACCTGA CGCTGGAGCG CCGCGCGGGC CGGGAGATCC GCGACGGGCT GTCCAGGCCG
CTGCTCGATG CCGTTGCCGG GCGCCTGGCG CGCGGCGAGC AGAGCCTGCT GTTCCTCAAC
CGCCGCGGCT ACGCGCCGGT GCTGGCGTGC GACGCCTGCG GCTGGTTGTC GGGCTGCCCG
CGCTGCTCGG CGTATCTGGT GCTGCACAAG CCGGAGCACC GGCTGCGCTG CCACCACTGC
GGCTACGAAT CGCGCATCCC GCACCATTGC CCGGACTGCG GCAACGTCGA CATCGCGCCG
CTGGGGCGCG GCACGCAGCG CATCGAGGAG ACCCTCGGCG CGCTGTTTCC GCAGGCGCGC
GTGGCGCGCA TCGACGCCGA CTCCACCCGC CGCAAGGGCA GCGCCGAGGC GCTGTTCGAC
ACCGTGCACG AAGGGGCCGT CGATATCCTG ATCGGCACGC AGATGGTCGC CAAGGGGCAC
GACTTTCAGC GCGTGACGCT GGTGGGCGTG GTGGCGCCCG ATGCGTCCCT GTTCAGCCAC
GACTTCCGTG CCGGCGAGCA CCTGTTCGCC TCGCTGATGC AGGTGGCCGG GCGCGCCGGC
CGTGCCGGGC TGGCGGGCGA AGTGCTGATC CAGACCCGCT ACCCGGATGC CCCCGCCCTG
CTGGCGCTGG TGCGGCACGA TTACGCCGGC TTCGCGCGCC AGCTGCTGCG CGAGCGCAAG
CAGGCCTGCC TGCCGCCGTT CGCCTACCAG GCGCTGCTGA CCGCCGAGCA CCGCGAGTTG
GCGCGCGCGC TGGAATTCCT CGGCGCCGCG CGCGCGGCCG GGCAGGCCGT GGCCGAAGCC
CAGAGCCTGC CGGTGCAACT GCACGATCCG GTGCCCATGA CCATGGTGCG CCTGGCCAAC
CGCGAACGCG CCCAACTGCT GCTCGAAAGC GCTTCGCGCG CCGCCCTGCA GCGGCTGCTG
GCCACCTGGA CCGACGGGTT TGGCGACATC GGCCGGACGG TCAAGGGCGT GCGCTGGCAG
CTCGAGATCG ACCCGCTGCG GATCTGA
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| Protein sequence | MTATRVDAAP PAVAQAARAG AIARVVIDTP LDAVFDYRCA QPVVPGQLVV VPFGSRRVVA
LVVESAGTTE VPADRLRDVE RVLDWVPPLD AEWRALAEFA AGYYHRALGE VTLPALPPLW
RTPGSWDSLA RHATETVYVM REPARAALLD SIPRRAAGAM RLAEALTGDG ELSASAAVAL
HGQATAKLRD WAAVGWVGAE LRPRPLLPVP RDLPPASVAP ALNAEQAAAV EAIAQAGAGG
GFAPFLLYGV TGSGKTEVYL HAIADALARD PAAQVLMLVP EINLTPQLEA RIAARFPGVP
LAALHSGLAE QPRALNWLAA HRGEARIVLG TRLAMLASLP HLALILVDEE HDTSYKQQEG
LRYSARDLAL WRAKQRGIPV VLGSATPSLE TWWRAEQGTT ARLVLSQRAQ ADAVLPRVSL
IDLTLERRAG REIRDGLSRP LLDAVAGRLA RGEQSLLFLN RRGYAPVLAC DACGWLSGCP
RCSAYLVLHK PEHRLRCHHC GYESRIPHHC PDCGNVDIAP LGRGTQRIEE TLGALFPQAR
VARIDADSTR RKGSAEALFD TVHEGAVDIL IGTQMVAKGH DFQRVTLVGV VAPDASLFSH
DFRAGEHLFA SLMQVAGRAG RAGLAGEVLI QTRYPDAPAL LALVRHDYAG FARQLLRERK
QACLPPFAYQ ALLTAEHREL ARALEFLGAA RAAGQAVAEA QSLPVQLHDP VPMTMVRLAN
RERAQLLLES ASRAALQRLL ATWTDGFGDI GRTVKGVRWQ LEIDPLRI
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