Gene RSc3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3259 
Symbol 
ID1222123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3513078 
End bp3513569 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content71% 
IMG OID637239676 
Producthypothetical protein 
Protein accessionNP_521378 
Protein GI17547976 
COG category[S] Function unknown 
COG ID[COG5501] Predicted secreted protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGA TGCAAGACCA CGCGACCGAC CCCATCAACC CGACCCGCCG CGACGTGCTG 
CGCGCGGGCG CCATGATGGC GCTGCTGGTC TCCGCCGGCC TCGCCACCCC GGCGCAGGCC
GCCGACTGGA ACAAGAGCGC GTTCGACGCC AGAGGCGTGG GCGACGTGCT CAAGAGCCTG
GGCGGCGGCG CTGTCGACAA GGGCGGCGCG GGCATCCAGT TCAACGCCCC GGACATCGCC
GAGAACGGCG CGGTGGTGCC GCTGGTGGTG ACCAGCTCGC TGCCGGGCAC GGACCTGATC
GCCATCCTGG TCGAGAAGAA CCCGAACACG CTGGCCGCCA CCTTCGCCAT CCCCGCCGGC
ACCGAGCCGT ACGTCAACAC GCGCGTGAAG ATGGGACAGA CCTCGATGGT TTACGCGGCG
GTGCGCGCGG GCGGCAAGTG GGTGCTGGCG AGCAAGGAAG TCAAAGTGAC ATTGGGCGGC
TGCGGCGGCT GA
 
Protein sequence
MRAMQDHATD PINPTRRDVL RAGAMMALLV SAGLATPAQA ADWNKSAFDA RGVGDVLKSL 
GGGAVDKGGA GIQFNAPDIA ENGAVVPLVV TSSLPGTDLI AILVEKNPNT LAATFAIPAG
TEPYVNTRVK MGQTSMVYAA VRAGGKWVLA SKEVKVTLGG CGG