| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3167 |
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| Symbol | |
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| ID | 1222030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3426451 |
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| End bp | 3427341 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637239585 |
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| Product | hypothetical protein |
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| Protein accession | NP_521288 |
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| Protein GI | 17547886 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAGA GCATTGAGTA TTTTCAGCTC GCTATTGGAT ACCAGCCGAA CTTTGCGGCC
GCCTATGATG GCGTGGCCGA TGCTTACACG ATGCTGGCAT GTCGCGGCGT GAGCCCTGCG
CGCGAAACGT TTCATCAAGC AAAAATGGCA GCCAGGAAAG CGCTGCAGAT TGAACCTGAT
TTGGGTGAGG CTTATGCATC ACTGGCCCAT GTGCGTTTGC ACGATTGGGA TTGGGTCGAT
CTGGAGCGGG ATTTCCTGCG CGCCATTGAA CTGAATCCAG GACACGCGAT CGCCTACTAC
TGGTACGCGG AATATCTCAT GATGGCAGGC AGAGCCGAAG ACGCCATTGC CAGGGTCAGG
CAGTCCCAAC AGATGGATCC GTTGAATTCA GTGCTGAATT CATCTGTTGC CATCATCTTG
TACCTTGCTC GGCGATACGA CCAGGCACGG GAAGAGCTCA ATAAAGCCCT GGAAATCGAT
CCAAATCACT TTCTGCTTCA CTTCAGGCTG GGATTGGTTT ACCAGCAACA GAAGTTGTTC
CATGACGCAA TCGAGGAGAT GCAGAAGGCT GTAACGCTTT CCGGGAGGAG CACAGAGGCG
CTGACAGGGC TGGCCCAGAC CTATGCTGCC GCCGACATGA GAGCCGCCAT GCAGCAGATC
GTGGATGCGC TGGAGACGGA ATCCGAACAG CACTACGTCC ACCCCTACAA CATGGCGAAA
GTGTTTGGTT CGCTCGGGGA CAAAGAGCAG ACCTTCGGCT GGCTGGAAAA AGCCTACGAT
GAGCACAGTC CTGACTTCAT TGAGCTCAGG ACAGAACCTA CCTTCGACAG CGTTCGCTTC
GATCCCAGAT TCTCTGAACT GCTATCCCGC GTCGGGTTCA ACCAGATCTG A
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| Protein sequence | MRKSIEYFQL AIGYQPNFAA AYDGVADAYT MLACRGVSPA RETFHQAKMA ARKALQIEPD
LGEAYASLAH VRLHDWDWVD LERDFLRAIE LNPGHAIAYY WYAEYLMMAG RAEDAIARVR
QSQQMDPLNS VLNSSVAIIL YLARRYDQAR EELNKALEID PNHFLLHFRL GLVYQQQKLF
HDAIEEMQKA VTLSGRSTEA LTGLAQTYAA ADMRAAMQQI VDALETESEQ HYVHPYNMAK
VFGSLGDKEQ TFGWLEKAYD EHSPDFIELR TEPTFDSVRF DPRFSELLSR VGFNQI
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