Gene RSc3136 details

Gene Information

• Locus tag: RSc3136
• ID: 1222000
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: -
• Start bp: 3382588
• End bp: 3384573
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637239554
• Product: putative methyl-accepting chemotaxis transmembrane protein
• Protein accession: NP_521257
• Protein GI: 17547855
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.598743
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGAACGT CCGCCCCTCA GCACGCCCCC CAATCCGCGA CCAGCCTGGG CTCCCGGCTG 
GCCGTCGCCG GCCTGGCCGC CCTGGTCCTG GTGTTCGGCG CCTTTGCGCT GGCGATCTCG 
CAATCCAGCC TGCGCACGCT GGAAGACCAT GCGCAGTCGG CCATGCGCGA CCAGGAAGCC 
GCCATGCGCG ACATGATCGC CCTGTTCGAC GGCACCATGC GCACCGAGGC CGACCGCTTC 
CTGACCGCCT TCGCGGATGC GGCGCCCGGC CCGTACAGCG TGGACCCGGC GCAGACCGTG 
GCGGTGGCCG GCAAGCCCAC GCCCACCTTC AGGAGCGGCG ACACGGCGAT GAACCTCGAT 
TTCGCCATCC CCGACAAGTT CTTCGCCCGC ACCGGCGGCA CCATCGCCAC CGTGTTCGCC 
CGCACCGGCG ACGATTTCGT GCGCGTGACC ACCTCGCTCA AGAAAGAGAA CGGCGAGCGC 
GCCATCGGCA CGCTGCTCGA CCGCGCCCAT CCGAGCTACA GGGCGCTGAT GGCGGGCGAG 
TCGTTCCGCG GGCTGGCATG GCTGTTCGGC GTGCCCTACA TGAGCAAGTA CGAGCCGGTG 
CGCGATGCCG CGGGCAAGGT GGTCGGCGCC CTGTACGTGG GCGTGGACGT GCGCGCGGAA 
CTGGCGCTGC TCAAGGACAA GATCCGCTCG CACGGCATCG GCAAGACCGG CGGCTACTTC 
GTCATCGACG GCAAGGCGGG CGCCGACCAG GGCAAGGTGC TGATCGACCG CGACCCGGGC 
CGCGAAGGCA AGAACCTGCT GGATGCCAAG GACGCCGACG GCCTGGCCTG GGTGCGCGAG 
ATGATCGAGC GCAGGGACGG CATCCTGCGC CACACGCTGG CCGACACCGA AGGCGGCCCG 
GCGCGCGCGC GCTTCACCGT GTTCACGCAG TATCCGGACT GGAAGCTGGT GATTGCCGGC 
ACCGCCTACG TGGATGAGCT GGAGGCCGAC CTGGTCTCGG CGCGCAACCG CTTCCTGCTG 
CTCGGCCTGG CGCTGGGCGC GCTGCTGGCG GGCGGCCTGT ACTGGATGCT GCGCCGCGCG 
GTCAGCGCGC CGCTGGCCGA GGTGGCGGGC GTGGCCCGGC GCGTGGCCGC CGGCGACCTG 
ACGCACCGCT TCTCCGGCAC CCGCCGCGAC GAGATCGGCC AACTGATGCA CGCCATCAAC 
GGCTTGGGCG ACGGCCTGAG CGGCATTGTC GACAAGGTGC GCGCGAGCGC CTCGACCATC 
GCCTCGAGCA CCGGCCAGAT CGCCGCCGGC AACGTCGACC TGTCGGCGCG TACCGAGGCG 
CAGGCCGGCA ACCTGGAGCG CACCGCCTCC AGCATCGAGC AACTGGCCGC CACCGTGCGC 
CAGAACGCCG ACAGCGCTCA GCATGCGCAC GACATGGTGC AGTCCGCCAG CGAGGCCGCC 
AACGCGGGCG GCCGGACGGT GGCGCGGCTG GTCGGCACCA TGTCGGGCAT CCACACGACG 
GCGCAGAAGA TTGCCGACAT CACCGGCATC ATCGACGGCA TCGCCTTCCA GACCAACATC 
CTGGCGCTGA ACGCCGCCGT GGAGGCGGCC CGCGCGGGCG AACAGGGTCG CGGCTTCGCG 
GTCGTGGCCG GCGAGGTGCG CAGCCTCGCG CAACGCAGCG CGGCGGCCGC CAAGGAAATC 
AAGGAACTGA TCAGCCGCTC GGTGCAGGAA GTGCAGGCCG GCAACGAAGC GGCGCGCGGC 
GCGGGCGAGG CCATGCAGGA CATCGTCACG CGGGTCGAGC GCATCGCCGG CATCATGGGC 
GAGATCAGCC ACGCCTCGCG CGAGCAGTCG CAGGGCATCG AGGAGGTCAA CCGCGCGGTG 
ACCTCGATGG ATGAGGTGAC GCAGCAGAAC GCCGCGCTGG TGGAAGAAGC CGCCGCCGCG 
GCCGAGAGCC TGCGGCAGCA GGCCCAGGAA CTGCGCGGCG CGGTGGATGT GTTCCGGCTG 
GCCTGA 

 

Protein sequence

MRTSAPQHAP QSATSLGSRL AVAGLAALVL VFGAFALAIS QSSLRTLEDH AQSAMRDQEA 
AMRDMIALFD GTMRTEADRF LTAFADAAPG PYSVDPAQTV AVAGKPTPTF RSGDTAMNLD 
FAIPDKFFAR TGGTIATVFA RTGDDFVRVT TSLKKENGER AIGTLLDRAH PSYRALMAGE 
SFRGLAWLFG VPYMSKYEPV RDAAGKVVGA LYVGVDVRAE LALLKDKIRS HGIGKTGGYF 
VIDGKAGADQ GKVLIDRDPG REGKNLLDAK DADGLAWVRE MIERRDGILR HTLADTEGGP 
ARARFTVFTQ YPDWKLVIAG TAYVDELEAD LVSARNRFLL LGLALGALLA GGLYWMLRRA 
VSAPLAEVAG VARRVAAGDL THRFSGTRRD EIGQLMHAIN GLGDGLSGIV DKVRASASTI 
ASSTGQIAAG NVDLSARTEA QAGNLERTAS SIEQLAATVR QNADSAQHAH DMVQSASEAA 
NAGGRTVARL VGTMSGIHTT AQKIADITGI IDGIAFQTNI LALNAAVEAA RAGEQGRGFA 
VVAGEVRSLA QRSAAAAKEI KELISRSVQE VQAGNEAARG AGEAMQDIVT RVERIAGIMG 
EISHASREQS QGIEEVNRAV TSMDEVTQQN AALVEEAAAA AESLRQQAQE LRGAVDVFRL 
A