| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3067 |
|---|
| Symbol | |
|---|
| ID | 1221930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 3304751 |
|---|
| End bp | 3305494 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637239484 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_521188 |
|---|
| Protein GI | 17547786 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3295] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.438529 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.387636 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC TGTCCCGTCC CCCGCTGTCC GCTCATCCCG TTGCCGCCAA GCGTCCGGCG
CGCGGCGAGC ACGTCGCCAA CCACCGCGCC ACCCTGGTGC GTTGGCTGCG CAAGACGCAC
GGCTGGTTCG GCCTGTGGGG CGCGGTGATG GGGCTGATCT TCGGCGTCTC GGGCATCTGG
CTGAACCACC GGGCAGTGAT GAAGCTGCCA GTGGCGCAGC AGAAGACCAC CTCGCAGATC
GCCCTGTCCG ATCCCGTGCC CGCCACACCC GACGCCATGG GCGCGTGGCT GCAACAGGCG
CTGGGCCTGC CGGAGGCGCC ACGACGCGTG CGGGTCAAGC CGGCCCAGCC GGTGCCGTGG
GCCGAGCGCG GCGGCAAGAG CGACAAGAGC GAAGCACGCC ACGACGCCTC CGCCGCCAGG
CCGCTGATGC AGCCCGAGCA ATGGACCTTC GATTTCGACG CGGCCGTCAC GCAGATCCAG
GTGGAGTACT GGGCCGGCAA CCGCTCGGCC AGCGTGCGCC AGACCGACAA CGGCCTCCTC
GGCACGCTGA TCAGCCTGCA CCTGGGCCGG GGCATGACGG TGCCGTGGCT CCTGCTGGTC
GATACGCTGG CCGGGTGCCT GATCTTCCTG TCGCTGTCGG GCTTGGCGCT GTGGGTGCTG
ACCACCAAGC GGCGCACCGT CGGCTGGACG ATCTTCGGGC TCGGCAGCCT GCTGGCCATC
GGGCTGGCGG TGGCCCGGCT GTAG
|
|---|
| Protein sequence | MTDLSRPPLS AHPVAAKRPA RGEHVANHRA TLVRWLRKTH GWFGLWGAVM GLIFGVSGIW
LNHRAVMKLP VAQQKTTSQI ALSDPVPATP DAMGAWLQQA LGLPEAPRRV RVKPAQPVPW
AERGGKSDKS EARHDASAAR PLMQPEQWTF DFDAAVTQIQ VEYWAGNRSA SVRQTDNGLL
GTLISLHLGR GMTVPWLLLV DTLAGCLIFL SLSGLALWVL TTKRRTVGWT IFGLGSLLAI
GLAVARL
|
|---|
| |