| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3014 |
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| Symbol | rplV |
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| ID | 1221868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3236777 |
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| End bp | 3237106 |
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| Gene Length | 330 bp |
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| Protein Length | 109 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637239422 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | NP_521135 |
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| Protein GI | 17547733 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000615248 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00191029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGAAGTTA AAGCGATTCA TCGCGGCGCC CGTATCTCCG CACAGAAGAC GCGTCTGGTC
GCTGACCAGA TCCGTGGTCT GCCGATCGAG CGTGCGCTCA ACGTTCTGGC GTTCAGCCCG
AAGAAGGCTG CTGTCATCGT CAAGAAGGTG GTGGAGTCCG CCATCGCGAA CGCCGAGCAC
AACGAAGGCG CCGACATCGA CGAGCTGAAG GTCAAGTCGA TCTACATCGA CAAGGCCACC
TCGCTCAAGC GCTTCACCGC GCGTGCGAAG GGCCGCGGCA ACCGCATCGA GAAACAAACC
TGTCACATCA CTGTGACGCT GGGCAATTAA
|
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| Protein sequence | MEVKAIHRGA RISAQKTRLV ADQIRGLPIE RALNVLAFSP KKAAVIVKKV VESAIANAEH
NEGADIDELK VKSIYIDKAT SLKRFTARAK GRGNRIEKQT CHITVTLGN
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