| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2974 |
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| Symbol | pilN |
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| ID | 1221828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3206459 |
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| End bp | 3207091 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637239382 |
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| Product | fimbrial type-4 assembly membrane transmembrane protein |
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| Protein accession | NP_521095 |
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| Protein GI | 17547693 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.815232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACG AAAGCGTCAA CGCGCTCCCG AGCGTCAATC TGCTGCCCTA TCACGCCGAA
CGGCGTGCGG GCAAGCGCAA GAAGGTCTTC ATGAGCCTGG GCGGTGCAGC CGTCGTGGGC
GCCGCATTGG TGTTCCTTGG CGGCATGGTG ATTGATCAGC AGACCGAAGA GGCTCAGCGC
ATCAACGACA TCCTCACGCA GAAGAATGCG GAGATGGACA AGCAGATCGC CGAGGTTAAC
ACCCTCAAGA AGGACATCGA CGACCTGCTG CAGCGGCAGC AGGCGGTGGA AAGCCTGCAG
AACCAGCGCA ACCGCCCGGT GCAGCTGCTG GAAGAGCTGG TGCGTCGGGT GCCGGACGGC
ATCTACTTGA CCGCGCTCAA GCAGGACGGT GACCGCTACA CGGTGTCCGG TGTGGCGCAG
TCCAACGAAC GGGTGTCGGA TCTGCTGCGC AACCTGGGGT CGGTGTCCTG GCTGGATCGT
GCCGAGCTGG GCGAATCCGT TGCCACCACC ATGACGAACA ACCTGAAGGA GCAGCGCCGC
CTCTTCAACT TCACCATCCG CTTCACGTGG AAGGCCGAGC CGGCAACGCC GGCCAAGCCG
GGCAGTGCAG CCAGCGCAGT GGCGGGGAAA TGA
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| Protein sequence | MANESVNALP SVNLLPYHAE RRAGKRKKVF MSLGGAAVVG AALVFLGGMV IDQQTEEAQR
INDILTQKNA EMDKQIAEVN TLKKDIDDLL QRQQAVESLQ NQRNRPVQLL EELVRRVPDG
IYLTALKQDG DRYTVSGVAQ SNERVSDLLR NLGSVSWLDR AELGESVATT MTNNLKEQRR
LFNFTIRFTW KAEPATPAKP GSAASAVAGK
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