| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2972 |
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| Symbol | pilP |
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| ID | 1221826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3205255 |
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| End bp | 3205800 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637239380 |
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| Product | fimbrial type-4 assembly lipoprotein |
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| Protein accession | NP_521093 |
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| Protein GI | 17547691 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3168] Tfp pilus assembly protein PilP |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.242531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGGCC AAGTCATGAC CCGCCGCCAG GTAACGCGTC TCATACATCT TTCGCCACTG
TGTCTGGCCG TGGTGCTGGC CGCTTGCGGC GCCAGCGCGG ACGACGAGCT GGAGCAATGG
ATGCAGCAGG CACGCAGCAC CGTCAGCACC AGGCTGGCCC CGCTGCCGGA GCCCAAGCCA
TACGCGCCGC GCGAATACAC GACCACCAAG CAGACTGATC CGTTCAGTGT GCAGAAGGTG
GCGGAGCTGT CGCGCGCGCA AAACGAATCG CCGGAACCGG GTCACCGCCG TGAGCCGCTC
GAGGACTATC CGCTGGAAGC CTTCAAGCTG CTCGGGACGA TGAAACGCAA CGGTGAGTCG
GAAGCCGTCC TGTCTGTCGG GGACAAGACG CAGCACGTGC ATGTGGGGCA GTACATCGGA
CAAAACTATG GCCGCATCGT CCGCATCGGC GATCAGGAAC TCACCCTGCG TGAGCTGGTG
CGCGAAGGCA CGGCCGAATG GAAAGAAAAA ATGACGACCC TGAAAGTTCA GGAGGGCGCG
CAATGA
|
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| Protein sequence | MKGQVMTRRQ VTRLIHLSPL CLAVVLAACG ASADDELEQW MQQARSTVST RLAPLPEPKP
YAPREYTTTK QTDPFSVQKV AELSRAQNES PEPGHRREPL EDYPLEAFKL LGTMKRNGES
EAVLSVGDKT QHVHVGQYIG QNYGRIVRIG DQELTLRELV REGTAEWKEK MTTLKVQEGA
Q
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