| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2959 |
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| Symbol | vacJ |
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| ID | 1221813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3187316 |
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| End bp | 3188125 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637239367 |
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| Product | lipoprotein precursor (VACJ) transmembrane |
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| Protein accession | NP_521080 |
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| Protein GI | 17547678 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.455376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACAA CAACATCGAA TCGGACCCTG CGCGGCCTTG CGCTGGGCAT GGCGGCAAGC
GCCGTCCTGC TCGCGGGCTG CGCCACCGGG CCCAACGCCA ATCCGGCCGA CCCGATCGAG
CCGTTCAACC GCGAAGTCTT CCGCATCAAC GACGATCTCG ACAAGGGCGT GCTCAAGCCC
GTTGCACAGA CGTATGTCGA CGTGGTGCCG TCGCCGGCGC GCACGGCGGT GTCGAATTTC
TTCTCCAACG CGGGTGACGT CTATTCGGCG GTCAACAACC TGCTGCAGCT GAAGGGTACG
GCCGCGCTGG AAGACACCAT GCGGGTGGCC ATCAACACCG TCCTGGGCCT CGGCGGCCTG
ATCGACATCG CGTCGGACGC CGGCTTGCCG AAGCACAAGG AAGACTTCGG CCAGACCCTC
GGCGTGTGGG GCGTGCCGGC CGGTGCGTAC ATCGTCTGGC CGCTGCTGGG TCCGAGCACC
GTGCGCGACA CCGCGGGCTT CCTGGTCGAC TGGCAGCTGG ATCCGCTCAC GTACTTCAAC
AACAGCGCGG TCACCTATTC GCTGGCGGCC CTGCGCGTGG TCGATGCGCG CGCGGGCCTG
CTGGGTGTGG GCAATGTGCT GGAAGAGGCG GCGGTCGACA AGTACACCTT CATGCGCGAT
GCCTATCTGC AGCGCCGCCG CTACCTGATC TACGACGGCA ACCTGCCCGA GGACACCGAT
GGCAAGAATC CTCCGGAAGG GGCCGAACAG GGCGGGAGCG TGTCGCCGTA CCATCGCTTC
ACCCCCAACT GGCCGGTGTT CCGCCGCTGA
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| Protein sequence | MRTTTSNRTL RGLALGMAAS AVLLAGCATG PNANPADPIE PFNREVFRIN DDLDKGVLKP
VAQTYVDVVP SPARTAVSNF FSNAGDVYSA VNNLLQLKGT AALEDTMRVA INTVLGLGGL
IDIASDAGLP KHKEDFGQTL GVWGVPAGAY IVWPLLGPST VRDTAGFLVD WQLDPLTYFN
NSAVTYSLAA LRVVDARAGL LGVGNVLEEA AVDKYTFMRD AYLQRRRYLI YDGNLPEDTD
GKNPPEGAEQ GGSVSPYHRF TPNWPVFRR
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