Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2925 |
Symbol | sspB |
ID | 1221779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3156399 |
End bp | 3156896 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637239333 |
Product | ClpXP protease specificity-enhancing factor |
Protein accession | NP_521046 |
Protein GI | 17547644 |
COG category | [R] General function prediction only |
COG ID | [COG2969] Stringent starvation protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGAAA CTTCAACCAA GCCCTATCTG ATCCGGGCCA TCTACGAATG GTGCACGGAC AACGGCTTCA CGCCGTACAT CGCCGTGTTC GTCGACAACA GTACCAACGT GCCCCGAGAG TTCGTCAAGA ACGACGAGAT CGTGCTGAAC GTCAGCTTTG ATGCGACCAG CCAGCTCGAT ATGGGCAATG AGTGGATCTC CTTCCACGCG CGCTTCTCGG GCGTCTCGCG CAAGATCGAG GTGCCGGTCG ACAACGTGCT CGCCGTGTAC GCGCGCGAGA ACGGGCAGGG CATGGCATTC CCCGTCGAAC GCAGCACGCC GCCCGCGCAG GCTGCGACCG AACGCGAGAA CAGCCCGCCG CCCAAGCTGT CGGCGGTGGA GTCCGAAGCC GCGCCGGAGC CGGCCACCGC CGAAACGCAG GGCGGTTCCG ACGACGAGCC CACGCCGCCC AGCGTGCCGC GTATCGGAGG CAAGCCGTCG CTGAAGGTCG TCAAGTAA
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Protein sequence | MSETSTKPYL IRAIYEWCTD NGFTPYIAVF VDNSTNVPRE FVKNDEIVLN VSFDATSQLD MGNEWISFHA RFSGVSRKIE VPVDNVLAVY ARENGQGMAF PVERSTPPAQ AATERENSPP PKLSAVESEA APEPATAETQ GGSDDEPTPP SVPRIGGKPS LKVVK
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