| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2879 |
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| Symbol | rpe |
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| ID | 1221732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3107102 |
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| End bp | 3107830 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637239286 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | NP_521000 |
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| Protein GI | 17547598 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.403873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTGCAG CCATCGATCC GTCCGGTTTC CGCATCGCCC CGTCCATCCT GTCAGCCGAT
TTTGCCCGCC TGGGCGAGGA GGTACGCCGC GTGATCGAGG GCGGCGCCGA CTGGATCCAC
TTCGATGTGA TGGACAACCA CTACGTGCCG AACCTGACGG TCGGCCCGCT GGTCTGCGAG
GCGATCCGCC CGCACGCCCA GCGCGACGGC AAGCCGGTGC CGATCGATGT GCACCTGATG
GTGCGCCCGG TCGACCGCAT CATCCCCGAC TTCGCCAAGG CCGGCGCCGA TCTGATCACC
TTCCATCCGG AGGCGTCCGA GCACATCGAC CGGTCGCTGG CGCTGATCCG CGACCAGGGC
TGCAAGGCCG GCCTGGTGTT CAACCCGGCC ACGCCGCTGC ACTACCTGGA CCACGTGATG
GATCGCCTGG ACATGGTGCT GATCATGTCG GTCAACCCGG GCTTCGGCGG GCAGTCGTTC
ATTCCGGAGG CGCTCACCAA GCTGCGCGCG GTGCGCCAGA AGCTGGATGC CTACGCAGAC
AGGACCGGCC GCCGGATCCT GCTGGAAATC GACGGCGGGG TGAAGGCCGA CAACATCGCC
GAGATCGCCC GCGCGGGTGC CGACACCTTC GTCGCCGGCT CGGCCGTGTT CGGCAAGCCG
GATGCGGACG GCGGCTATCG CGGCACGGTG GGTGCGCTGC GCAGCGCGCT CGAGGGCATC
ACGGCATGA
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| Protein sequence | MPAAIDPSGF RIAPSILSAD FARLGEEVRR VIEGGADWIH FDVMDNHYVP NLTVGPLVCE
AIRPHAQRDG KPVPIDVHLM VRPVDRIIPD FAKAGADLIT FHPEASEHID RSLALIRDQG
CKAGLVFNPA TPLHYLDHVM DRLDMVLIMS VNPGFGGQSF IPEALTKLRA VRQKLDAYAD
RTGRRILLEI DGGVKADNIA EIARAGADTF VAGSAVFGKP DADGGYRGTV GALRSALEGI
TA
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