| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2869 |
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| Symbol | dppB1 |
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| ID | 1221717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3091327 |
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| End bp | 3092304 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637239271 |
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| Product | transmembrane dipeptide transport system permease ABC transporter protein |
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| Protein accession | NP_520990 |
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| Protein GI | 17547588 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0598671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.76334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTGT TCCTGATTCG ACGGCTGCTG GAATCGGTGG CGGTGTTGCT GGTGATGTCG
ATCCTGGTGT TCCTGGGCGT GTACGCCATT GGCAATCCGG TCGACATCCT CATCAACCCG
CAGGCGGACC AGCAGGACAT CGCGCGCACG ATTGCCGCGC TGGGGCTCGA CAAGCCGCTG
TGGCAGCAGT ACCTGTACTT CCTGAAGGGC GCGCTGCAGG GCAACCTGGG CGTGTCGTTC
GCGCACGGCA CGCCCGCACT CAAGCTGATC TTCGAGCGCA TGCCGGCGAC GTTCGAGCTG
GCGGCGTTCG CCATGCTGCT GGCGATCGTG CTGGGGATTC CGCTCGGGCT GTGGGCGGGG
CTGCGGCCGA ACGGGGTGGC CAACCGCACC ATCATGACGG TGTCGATCCT GGGGTTTTCG
CTGCCGACGT TCTGGGTCGG GCTGATGCTG ATCATGGTGT TCGCGGTGCA GCTGGGCTGG
CTGCCGTCCA ACGGGCGGGG CGAGACGCGG TTGCTGTTCG GCATCCCGGT GAGCTTTCTG
ACGCTCGACG GGCTGCGGCA CCTGATCCTG CCGGGCGTGA CACTGTCGCT GCTCAACATC
GCCATGGTGA TCAGGCTGAC GCGCGCGGGG ACACAGGAGG CGATGCTGCA GGACTACGTG
AAGTTCGCGC GCGCCAAGGG GCTGTCGAAC GCGCGCATCG TCGGGGTGCA TGTGCTGAAG
AACATCCTGA TCCCGATCGT GACGGTGGTG GGCCTGCAGT TCGGTTCGGT GATCGCGTTT
TCCATCGTCA CCGAATCGAT CTACGCCTGG CCGGGGATGG GCAAGCTGAT CATCGATTCG
ATCCAACTGC TCGACCGTCC GGTGATCGTG GCCTATCTGC TGGTGATCGT GACGCTGTTC
ATCCTGATCA ATCTGGTGGT CGACCTGATC TACGGCGTGC TCGATCCGCG CGTGCGCCTG
TCCGAAAGCC GGAGCTGA
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| Protein sequence | MLVFLIRRLL ESVAVLLVMS ILVFLGVYAI GNPVDILINP QADQQDIART IAALGLDKPL
WQQYLYFLKG ALQGNLGVSF AHGTPALKLI FERMPATFEL AAFAMLLAIV LGIPLGLWAG
LRPNGVANRT IMTVSILGFS LPTFWVGLML IMVFAVQLGW LPSNGRGETR LLFGIPVSFL
TLDGLRHLIL PGVTLSLLNI AMVIRLTRAG TQEAMLQDYV KFARAKGLSN ARIVGVHVLK
NILIPIVTVV GLQFGSVIAF SIVTESIYAW PGMGKLIIDS IQLLDRPVIV AYLLVIVTLF
ILINLVVDLI YGVLDPRVRL SESRS
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