| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2856 |
|---|
| Symbol | |
|---|
| ID | 1221704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 3073860 |
|---|
| End bp | 3075179 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637239258 |
|---|
| Product | metabolite transport protein |
|---|
| Protein accession | NP_520977 |
|---|
| Protein GI | 17547575 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTT CCCCCTCCTC GTCCGCCATG GCGGCGCCGG CCGCCGATGC GGCGAACGGG
ACCAGCCGCA CGCGCATCGT CTTTGCGAGC TTCATCGGCA CGGCCATCGA GTTCTACGAT
TTCTACGTCT ATGCCACGGC GGCCGCGCTG GTCATCGGCC CGGTGTTCTT TCCGCGCGGG
TCGGCCACGG CGCAGGCGCT GTCCGCCTTC ATCACGTTCG GCATCGCCTT CATCGCACGG
CCGATCGGCT CATTCCTGTT CGGCCACTTC GGTGACCGCA TCGGCCGCAA GTCGACGCTG
GTCGCGTCGC TGCTGGTGAT GGGCATCTCG ACCACGCTGA TCGGCCTGGT GCCCGGCTAT
GACGCGATCG GCGGGCTGGC GCCGGTGCTG CTGTGCATCC TGCGCTTCGG GCAAGGCATC
GGGCTGGGCG GCGAATGGGG CGGCGCGGCG CTGCTCGCCA CCGAGAACGC GCCCGAGGGC
AAGCGGGCCT GGTTCGGCAT GTTCCCGCAG CTGGGGCCGT CGGTCGGCTT TCTGGCGTCG
AACGGGCTGT TCTTCGGCCT GGCGCTGTCG CTGTCCGACG AACAGTTCCG CAGTTGGGGC
TGGCGCGTGC CGTTCCTGGT GAGCGCGGTG CTGGTGGCGC TGGGCCTGTA TGTGCGGCTC
AAGATCGCCG AGACGCCGGC CTTCCAGGCG GCGATCGAGC GGCGGGAGCG CGCGCGCGTG
CCGATCGCCG CGCTGCTGGC GCATCACTGG TGGCCGACGC TGCTGGGCGC GCTGGCGATG
GTGGTCTGCT ACACGCTGTT CTATATCTCG ACCGTGTTCT CGCTGTCGTA TGGCGTGTCG
ACGCTGCACT TCACGCGACC GGGCTTCCTG GGGCTGCTGT GCCTGGCGGT GGTGTTCATG
GCGCTGGCCA CGCCGCTGTC GGCCTGGGCG TCGGACCGCT GGGGACGCAA GCCTGTGCTG
CTCACCGGCA TCCTCGCGGC CATCCTGTCG GGCTTCACGA TGGCGCCGCT GCTGGGCAGC
GGTTCGACGC CGCTGGTGGC GCTGTTCCTC ATCCTCGAGC TGTTCCTGAT GGGCGTCACC
TTTGCGCCGA TGGGGGCCCT GCTGCCGGAG CTCTTCCCGA CGCATGTGCG CTATACCGGC
GCCGGCGTGT CCTACAACCT GGGCGGCATC CTGGGGGCGT CGATCGCGCC GTACATCGCG
CAGGTGCTGG CGGCGCAGGG CGGCCTCGCC TGGGTGGGCG CGTACGTGTC GGCGGCGGCG
GCGGTGAGCC TGGCCGGTGT ACTGTGCATG CGCGAGACGC GGGATGCGCG GCTGATGTAG
|
|---|
| Protein sequence | MSASPSSSAM AAPAADAANG TSRTRIVFAS FIGTAIEFYD FYVYATAAAL VIGPVFFPRG
SATAQALSAF ITFGIAFIAR PIGSFLFGHF GDRIGRKSTL VASLLVMGIS TTLIGLVPGY
DAIGGLAPVL LCILRFGQGI GLGGEWGGAA LLATENAPEG KRAWFGMFPQ LGPSVGFLAS
NGLFFGLALS LSDEQFRSWG WRVPFLVSAV LVALGLYVRL KIAETPAFQA AIERRERARV
PIAALLAHHW WPTLLGALAM VVCYTLFYIS TVFSLSYGVS TLHFTRPGFL GLLCLAVVFM
ALATPLSAWA SDRWGRKPVL LTGILAAILS GFTMAPLLGS GSTPLVALFL ILELFLMGVT
FAPMGALLPE LFPTHVRYTG AGVSYNLGGI LGASIAPYIA QVLAAQGGLA WVGAYVSAAA
AVSLAGVLCM RETRDARLM
|
|---|
| |