| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2826 |
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| Symbol | pilC |
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| ID | 1221674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3040292 |
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| End bp | 3041557 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637239228 |
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| Product | fimbrial assembly transmembrane protein |
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| Protein accession | NP_520947 |
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| Protein GI | 17547545 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0198516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0282611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACAC GAGCACCGAC CGCGAACCGG TCCGCCGCCG CATCGGCACG CAAGACCGCC
GCCACGAAGG CGCCCACGCA GTACATCTTC GAGTGGGAAG GCAAGGACCG CAAAGGCAAG
ATCTTCAAGG GCGAGATGCG GGCGGAGAGC ATCACCGAAG TCAATGCGGT GCTGCGCAAG
CAAGGGCTGT CGATCACCAA GTCCAAGCGT CGACGCGCCG CGCGCGGCAA GAAGATCGTA
CCCAAGGACA TCGCCTACTT CACGCGCCAG CTGTCGACCA TGCTGAAAGC GGGCGTGCCG
CTGCTGCAAT CGGTCGACAT CATCGCGCGC GGGCACGCCA ACCCGAACTT CACCCAGCTG
CTGACGGAAA TCCGTGTCGA CATCGAGTCG GGCAGCAGCA TGGCGCAGGC CTTCCGCCGC
CATCCGCAGC ACTTCGATTC GCTGTACTGC AACCTGATCG ACGCCGGTGA GCAGGGCGGT
ATTCTCGACG CGCTGCTCGA GCGGCTGTCG ATGTACATGG AAAAGTCGAT CGCGCTGAAG
GCGCAGATCA AGTCGGCCAT GATCTATCCG ATCTCGGTGC TGACGGTGGC TTTCCTGGTC
ACGGTGGTGC TGATGATCTT CGTGGTGCCG GCGTTCAAGA ACGTGTTCGC CAGCTTCGGC
GCCACGCTGC CGGCCCCGAC GCTGGTGGTG ATGGGCATTT CGGACTTCTT CGTGAAGTGG
TGGTACATCA TCATCTTCAC GCCCATTGTC GGCATCTTCC TGTATGTGCG GGCTTTCAAG
CGCTCGGAGA AGGTGCAGCG CAACACGCAC AAGGCCATCC TGAAGATGCC GATCTTCGGC
AGCATCATCC GCAAGGCCAC CATCGCGCGC TGGACGCGTA CGCTGGCAAC CATGTTCTCG
GCCGGGACAC CGCTGGTGGA GTCGATGGAA TCCGTCGCGG GCGCCGCCGG CAACTGGGTC
TACTATGACG CCACCATGGA GATCCAGCAG GCGGTGCGCA TCGGTACCAG CCTCACCAAC
GCCATGCAGG CGACCCATGT GTTCGACAAC ATGGTGCTGC AGATGACGCA GATCGGCGAG
GAATCCGGCG CGCTGGACAA CATGCTGCTG AAGGTGGCCG AATTCTACGA GCGCGAGGTC
GATGACGCGG TGGCCAACAT CTCCGCCCTG ATCGAGCCGC TCATCATCGT GATCCTGGGC
GTGCTGATCG GGGGCATGGT GGTTGCCATG TACCTGCCGA TCTTCAAGCT GGGCCAAGTG
GTCTGA
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| Protein sequence | MATRAPTANR SAAASARKTA ATKAPTQYIF EWEGKDRKGK IFKGEMRAES ITEVNAVLRK
QGLSITKSKR RRAARGKKIV PKDIAYFTRQ LSTMLKAGVP LLQSVDIIAR GHANPNFTQL
LTEIRVDIES GSSMAQAFRR HPQHFDSLYC NLIDAGEQGG ILDALLERLS MYMEKSIALK
AQIKSAMIYP ISVLTVAFLV TVVLMIFVVP AFKNVFASFG ATLPAPTLVV MGISDFFVKW
WYIIIFTPIV GIFLYVRAFK RSEKVQRNTH KAILKMPIFG SIIRKATIAR WTRTLATMFS
AGTPLVESME SVAGAAGNWV YYDATMEIQQ AVRIGTSLTN AMQATHVFDN MVLQMTQIGE
ESGALDNMLL KVAEFYEREV DDAVANISAL IEPLIIVILG VLIGGMVVAM YLPIFKLGQV
V
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