| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2779 |
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| Symbol | |
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| ID | 1221626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2989588 |
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| End bp | 2991669 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637239180 |
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| Product | hypothetical protein |
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| Protein accession | NP_520900 |
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| Protein GI | 17547498 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.100642 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTGC TGTTTGAAGA AGGCGGCGAG ATCCGCGCAG GCACCGTCTT GTCCCAGCAG
GGCGAGGCCT ATCAGGTCGA ATTGCCGAGC GCCAAGCGCG CCAAGGTCAA GTCGCGTGAT
GTGCTGCTGC AGTTCGCCCA GCCGTCGGCC GGTGAACTGG CGCAGGCCGC GCAGGCGCTG
TCGTCGGAGA TCGACCTGGA TTTCCTGTGG GAATGCGCGC CCGCCGAGGA GTTCGGCTTC
ACTGATCTGG CCGGCGAGTA CTTCGGCACC GACGCCGATG CCACGCAGCA AGCGGCGCTT
GCGATCGCGC TGCACGGCTC GCCCGTCTAT TTCCGCCGCA AGGGCCGGGG CCGCTACCAG
CGGGCGCCCG AAGACCAGCT CAAGGCGGCG CTCGCCGGGC TGGAGCGCAA GAAGCAGCAG
GCCGCGCAGC AGGCCGCCTA CGAAGCCGAG CTGAAGGCCA TGCGCCTGCC CGAAGCCTTC
CGCGGCAAGG CGCTGCAGCT GCTGTTCAAG CCCGACAAGA ACAGCATCGA ATTCAAGGCG
TTCGATGCCG CGTGCACGGC GCTCGGGATG TCGCCGATGC GGCTGATGGT GGCGGTCGGC
GGCATCGCCA ATGCGCGTGC GCTGCACGAG GCGCGTTTCC TGTCGGAGTG TTTCCCGAAG
GGCATCGGCT TTCCCGACGT GACGGTACCG GAGCCGGCGC TCGACCTGCC GGTCGCCGAC
GTGCGCGCCT TCTCCATCGA CGACGTGACC ACCACGGAAA TCGACGATGC GATTTCGGTC
ACGCCGCTTG ATGCGGCCAC GGTGCGTATC GGCATCCACA TCGCGGCGCC CGGTTTCGGC
ATCCAGCGCG GCGAAGCGCT GGACGCGATC GCGCGCCAGC GGCTGTCCAC CGTGTATTTC
CCCGGCGACA AGATCACCAT GCTGCCGGAG TCGGTGGTGG ATCGCTACAC GCTGCAGGAA
GGGCGCGCGT GCCCGGCGCT GTCGCTGTAT GTGACGGTCG ATCGCGCCAC CTGGGCGGTG
AGCGCCAGCG AAACGCGCTG CGAGATCGTG ACGGTGGCGG CCAACCTGCG CCACAACCTG
CTGGACGAGA TCGTCACCGC CGAGGCGCTG GCTGCCGGCA CCGGCGATTA CCCGTTCAAG
GACGAACTCG CCGTCCTGTG GCCCTTCGCG GGCGCGCTGT ACGATGCCCG CCAGCAGGCA
CGCATCGCCA GCGGCCTGAA GCCGGAAGGC GCGCAGAAGG GCGACTACAG CTTCTACCTG
GACCCGATCC CCGAAGCCGA GGGCGGCGGC GAGCGCATCC GCATCGAGCA GCGCAAGCGC
GGCTCGCCGC TGGACAAGAT CGTCGCCGAG CTGATGATTC TCGCCAACAG CACCTGGGGC
CGCATGCTGG CCGATGCCGG CGTGCCGGGC ATCTACCGCA CGCAGAAGGC GTGGGGCATG
CACCGCACGC GCATGCAGAC CTACCCGGCG CCGCACGAGG GGCTGGGCGT GGCGCAATAC
GCGTGGAGCA CCTCGCCGCT GCGCCGCTAC GTTGATCTGG TCAACCAGTG GCAGATCGCG
GCGGTGGCGC AGCACGGCGT GATGGCCAAG CTGGTCGCGC CCTTCAAGCC GAAGGATGCC
GACCTGCTTG CCGCCGTGGC CGACTTCGAG GCCACGTATG CCGCCTACGC TGCGCACCAG
TCGACCATGG AGCGCTACTG GTGCCTGCGC TGGCTCAAGC AGGAAGCGCG CACCCGCACG
CAGGCCGTGG TGCTGAAGGA AGGCATGGTG CGCTTCGCCG AGATCCCGCT GATGACCCGG
GTGCCGGAAC TGGCGCAGAC CGCGCGCGGC ACGCACGTCG TGCTCGACGT GCTGGAGATC
GACGAGATCG GCCTGGAAGT GTCGTGCCGC GTGGTCGAGG TGCTTGCCCC GGCAGCGGAT
GCCGAGGTGG AGGCCGCCGC GCTGGAGGAC GAGCTGGCGC AAGCCGAAGC GGAAGCGCCG
GCCGAACCCC AGCCGGCCGC CGATGGAGAA GAAATCCGCG CCGAGACCGG CGATGCTGTG
GCGCCGCCGC AGCAGGACGA TGGAACGTCT GCCGCCAGCT AA
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| Protein sequence | MQLLFEEGGE IRAGTVLSQQ GEAYQVELPS AKRAKVKSRD VLLQFAQPSA GELAQAAQAL
SSEIDLDFLW ECAPAEEFGF TDLAGEYFGT DADATQQAAL AIALHGSPVY FRRKGRGRYQ
RAPEDQLKAA LAGLERKKQQ AAQQAAYEAE LKAMRLPEAF RGKALQLLFK PDKNSIEFKA
FDAACTALGM SPMRLMVAVG GIANARALHE ARFLSECFPK GIGFPDVTVP EPALDLPVAD
VRAFSIDDVT TTEIDDAISV TPLDAATVRI GIHIAAPGFG IQRGEALDAI ARQRLSTVYF
PGDKITMLPE SVVDRYTLQE GRACPALSLY VTVDRATWAV SASETRCEIV TVAANLRHNL
LDEIVTAEAL AAGTGDYPFK DELAVLWPFA GALYDARQQA RIASGLKPEG AQKGDYSFYL
DPIPEAEGGG ERIRIEQRKR GSPLDKIVAE LMILANSTWG RMLADAGVPG IYRTQKAWGM
HRTRMQTYPA PHEGLGVAQY AWSTSPLRRY VDLVNQWQIA AVAQHGVMAK LVAPFKPKDA
DLLAAVADFE ATYAAYAAHQ STMERYWCLR WLKQEARTRT QAVVLKEGMV RFAEIPLMTR
VPELAQTARG THVVLDVLEI DEIGLEVSCR VVEVLAPAAD AEVEAAALED ELAQAEAEAP
AEPQPAADGE EIRAETGDAV APPQQDDGTS AAS
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