| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2760 |
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| Symbol | |
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| ID | 1221607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2972045 |
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| End bp | 2973106 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637239161 |
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| Product | putative porin signal peptide protein |
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| Protein accession | NP_520881 |
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| Protein GI | 17547479 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.102409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.556039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAA CCACCGCAGT TCGCGGGATG CTGGCGTGCG CGGCGGCGCT GGCCGGCTGG
GCCGCCCCCG CCATTGCCGA GACCAATGTC ACGCTCTACG GCCGCGTGGC CACGGGTGTC
GACTACATCA GCAACGTGGC GAAGTCCGAC GGCGGCACCG GCGCACTGTG GCGTGGCGCG
GGCAACCAGT GGGGAACCAG CATGTTCGGC TTCAAGGGCA GCGAAGACCT GGGCGGGGGG
CTGCAGGCGA TCTTCCGGCT GGAATCGGGC TTCGACGCCG CCAAGGGCCG CACCAACGGC
GACGCGCTCT TCAACCGTCG CGCCTATGCC GGCCTGTCGA GCCCGGCCTG GGGCACGCTG
ACGATGGGCA AGAACCTGTT CATCAGCAAC GACGTGTGGT TCCTGGACCC GACCGGCCAG
CAGTTCATCG GCTCGGCGAC GCTGGTGCGC GGGCGCAACT GGCCGGGCGC GAACAACCTC
ATCGAATACC AGAGCCCGAC CTGGGGCGGC TTTCAGGTCG GCCTGCAGAC GGGGCTGGGC
GAGCAGCCGG GCTCGATCAC GGCGTCGCGG CGCGACGGAG TCTCGGCGGT CTATTCGAAT
GCGCTCGTGG AGCTGCGCGC CATCTACGAC GTGATCCGCG ACGGCAACGG CAACTACTCC
GACCTGTACA ACTTCTCGAA GGAGTGGACG CTGGGCGGCG TGCTCAAGCT GGATGCCTGG
AAGGTCTACG GCGCTTTCCA GCGCCTGAAC GCGCCGGATG CGGCGGCGGG CGCGCCGTCC
GCCGCCAGCC ACTACTGGAT CGGGGCGACC TATGACATCA CCCGTGCGCT GACACTGATC
GGCACGGTCT TCCGCACCGA CGTGAACAAC GGCGGCGGCC ACGCTACCCT GTTCATGGCC
GGCGCCAACT ACAACTTTTC CAAGCGCACG CTGCTGTACG CCACCTACGG CCGTGTGCAG
AACAGCAAGA ACGCCGCGTT CTCGGTGGAG GCCACCGACA ACCGGCCGCT GGCGGGCCAG
GGCCAGAACG GTGCCTACGC GGGCATCGTC CACTCGTTTT GA
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| Protein sequence | MNRTTAVRGM LACAAALAGW AAPAIAETNV TLYGRVATGV DYISNVAKSD GGTGALWRGA
GNQWGTSMFG FKGSEDLGGG LQAIFRLESG FDAAKGRTNG DALFNRRAYA GLSSPAWGTL
TMGKNLFISN DVWFLDPTGQ QFIGSATLVR GRNWPGANNL IEYQSPTWGG FQVGLQTGLG
EQPGSITASR RDGVSAVYSN ALVELRAIYD VIRDGNGNYS DLYNFSKEWT LGGVLKLDAW
KVYGAFQRLN APDAAAGAPS AASHYWIGAT YDITRALTLI GTVFRTDVNN GGGHATLFMA
GANYNFSKRT LLYATYGRVQ NSKNAAFSVE ATDNRPLAGQ GQNGAYAGIV HSF
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