Gene RSc2743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2743 
SymbolrlpB 
ID1221590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2952778 
End bp2953287 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID637239144 
Productputative lipoprotein B precursor transmembrane 
Protein accessionNP_520864 
Protein GI17547462 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2980] Rare lipoprotein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCTC GTCGCCGTTT CGTTCTCGCC CTGGCCGCTG CGCTGCCGGC GGCGGGCCTG 
CTGTCCGCTT GCGGCTTTCA CCTGCGCGGC AACAACGATT TCGCCTTCAA GCGGCTGTAC
ATCAACCTGC CGCAGAACTC GCAGATGCGC GCGCAGTTGC GCCGGCTGAT CGACAACGGC
TCGGACACGG TGGTCGTCTC CGACAAGCAG GATGCTGACG CCTTCCTGGA CGTGCTCAGC
GAGAACCGCG TCAAGACGAT TTCGTCGCTG ACACCGCAAG GCGTGGTGCG CGAGTACCGC
ATCACCTACC GCTTCAGCTT CCAGCTGCGC GACGCGCACG ACAACCTGCT GATCCCGCCG
TCGGAGATCA CCCTGTTCCG CGACCTGTCG TACAACGAGA CGCAGGTGCT GGCGAAGGAC
TACGAAGAGG CGGCGCTCTA CCGCGACATG CAGGGCGACA TCGTCAATCA GCTGGTGCGG
CGGCTTGCCT CCGTCAGGCT GCCGTCGTAA
 
Protein sequence
MPSRRRFVLA LAAALPAAGL LSACGFHLRG NNDFAFKRLY INLPQNSQMR AQLRRLIDNG 
SDTVVVSDKQ DADAFLDVLS ENRVKTISSL TPQGVVREYR ITYRFSFQLR DAHDNLLIPP
SEITLFRDLS YNETQVLAKD YEEAALYRDM QGDIVNQLVR RLASVRLPS