Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2743 |
Symbol | rlpB |
ID | 1221590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2952778 |
End bp | 2953287 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637239144 |
Product | putative lipoprotein B precursor transmembrane |
Protein accession | NP_520864 |
Protein GI | 17547462 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2980] Rare lipoprotein B |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCTC GTCGCCGTTT CGTTCTCGCC CTGGCCGCTG CGCTGCCGGC GGCGGGCCTG CTGTCCGCTT GCGGCTTTCA CCTGCGCGGC AACAACGATT TCGCCTTCAA GCGGCTGTAC ATCAACCTGC CGCAGAACTC GCAGATGCGC GCGCAGTTGC GCCGGCTGAT CGACAACGGC TCGGACACGG TGGTCGTCTC CGACAAGCAG GATGCTGACG CCTTCCTGGA CGTGCTCAGC GAGAACCGCG TCAAGACGAT TTCGTCGCTG ACACCGCAAG GCGTGGTGCG CGAGTACCGC ATCACCTACC GCTTCAGCTT CCAGCTGCGC GACGCGCACG ACAACCTGCT GATCCCGCCG TCGGAGATCA CCCTGTTCCG CGACCTGTCG TACAACGAGA CGCAGGTGCT GGCGAAGGAC TACGAAGAGG CGGCGCTCTA CCGCGACATG CAGGGCGACA TCGTCAATCA GCTGGTGCGG CGGCTTGCCT CCGTCAGGCT GCCGTCGTAA
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Protein sequence | MPSRRRFVLA LAAALPAAGL LSACGFHLRG NNDFAFKRLY INLPQNSQMR AQLRRLIDNG SDTVVVSDKQ DADAFLDVLS ENRVKTISSL TPQGVVREYR ITYRFSFQLR DAHDNLLIPP SEITLFRDLS YNETQVLAKD YEEAALYRDM QGDIVNQLVR RLASVRLPS
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