| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2727 |
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| Symbol | |
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| ID | 1221574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2933144 |
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| End bp | 2934679 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637239128 |
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| Product | multidrug resistance transmembrane protein |
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| Protein accession | NP_520848 |
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| Protein GI | 17547446 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGCGA ACGGATCGCG GGCGGATGCC GCGGCCTGGG CGGCCGTCGC GGCCGGCACC
CTCGGCGCCA TGATGGCCAC GCTCGACATC TCCATCGTGA ATTCGGCGCT GCCGACCATC
CAGGGCGAAA TCGGCGCCAC CAGCACCGAA GGCACGTGGA TCGCCACGGC CTACCTAGTC
GCGGAAATCA TCATCATCCC CCTGGCCGGA TGGCTGGAGA AACTGCTCGG ACTGCGCAAC
CTGCTGCTGG CGGCCACCGG GCTCTTCACC GGGTTCTCGA TGCTGTGCGG CGTCGCCGAG
ACCTTGCCGA TGATGGTGAT CGGGCGGGCG GGCCAGGGGT TCACCGGGGG CGTGCTGATC
CCCACCGCGA TGACCATCAT CGCCGCGCGG CTGCCCCGCG CGCAGCAGCC GCTGGGCACC
GCGCTGTTCG GCTCGACCGT CATCCTCGGG CCGGTCTTCG GCCCCATGCT CGGCGGCTGG
ATGACCACGC AGCTCAACTG GCACTACGCG TTCTTCATCA ACCTGCCGAT CTGCGGGGTG
CTGGCCGCGC TGCTCCTGCT CGGCATGCCC CATGAGCGCC CCCGCACGGC GCTGCTGCGG
GAGGCGGACT GGGCGGGCAT CGCCGGCCTC GCCCTCGGCC TGGGCGGCAT GACGGTGGTG
CTGGAGGAAG GCCAGCGCCT GCAATGGTTC ACCTCCCCTG CGATCCGCTG GCTGGCGGCC
GTGTCGGCGC TCGGCTTTGG CCTGCTGGGC TGGGGCCAGG CGCGCGCCCG CGCCCCGGTC
ATCCGCCTCG GGCTGCTGCG GGACCGGCAG TTCGGCGCCA TCGCGGTCAT GGCCATCGCG
GCCAGCATGG CGTTGTACGG CACCGCCTAC GTGATCCCCC AGTTCCTGGT CGGCATCGCG
GGCTACGACG CACTGCAATC GGGCTGGATC GTCCTGCTGT CGGGGCTGCC GATGATCGTG
CTGATGCCGA TGCTGCCCCT GATGCTGCGC TGGCTCGACG TCCGGCTGGC GGTCGGCGGC
GGCCTGCTGG TGCTGGCGCT AAGCGCCTAC ATCGAGACCG GGCTGAGCCC CCTGTCGACG
GGCAACTCGT TCGTGGCCTC GCAGCTGATG CGCGGGCTCG GCACCGTGCT GACCATGATG
TTCCTGAACC AGGCCGCCAT CCGCTCCGTG CCGCCGTCGC AGGCGAGCGA TGCCTCCGGG
CTCTACAACG GCCTGCGCAA CCTGGGCGGC TCGATCGCGC TGGCCTGCAT CGCCACGCTG
CAGGAGCAGC GGCTCTGGCT GCACAGCCGC CGCATCGAGG ACACCCTGCA GGCCAACGCG
GCCGGCGTGC AGGATTACAT CGCCGGCCAG GCCCACGCGC TGGGCAGCCA GGCCGCCGCC
CTGCTGTCGA TGGAGCAGTC CATCCAGGTG CAGGCGCTGA CGATGGCGTA TGCCGACCTG
TTCTGGCTGC TGACCGTGGC AATCCTGCTG GTGACGCCGC TGGTGGTCTT CCTGCGGCCC
CTGCCCCGCC ATGCCGGCCC GGTTGCCGGG CATTGA
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| Protein sequence | MTANGSRADA AAWAAVAAGT LGAMMATLDI SIVNSALPTI QGEIGATSTE GTWIATAYLV
AEIIIIPLAG WLEKLLGLRN LLLAATGLFT GFSMLCGVAE TLPMMVIGRA GQGFTGGVLI
PTAMTIIAAR LPRAQQPLGT ALFGSTVILG PVFGPMLGGW MTTQLNWHYA FFINLPICGV
LAALLLLGMP HERPRTALLR EADWAGIAGL ALGLGGMTVV LEEGQRLQWF TSPAIRWLAA
VSALGFGLLG WGQARARAPV IRLGLLRDRQ FGAIAVMAIA ASMALYGTAY VIPQFLVGIA
GYDALQSGWI VLLSGLPMIV LMPMLPLMLR WLDVRLAVGG GLLVLALSAY IETGLSPLST
GNSFVASQLM RGLGTVLTMM FLNQAAIRSV PPSQASDASG LYNGLRNLGG SIALACIATL
QEQRLWLHSR RIEDTLQANA AGVQDYIAGQ AHALGSQAAA LLSMEQSIQV QALTMAYADL
FWLLTVAILL VTPLVVFLRP LPRHAGPVAG H
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