Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2722 |
Symbol | |
ID | 1221569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2927996 |
End bp | 2929594 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637239123 |
Product | putative signal peptide protein |
Protein accession | NP_520843 |
Protein GI | 17547441 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.600184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCAA GACGTTATTG GGCCTTTGCG GGGGTCGTGC TGCTGTTCGT GGTCACGGCC GGGTTTGCGC TGGCCGGGCG CCTGCACTGG GCATGCGCGG CCATCCCCGG CATGCTGGCG ATGCTCGGCG TGCGCGACCT CACGCAGCCG CGCCATTCGG TGCTGCGCAA CTATCCGCTG TGGGGGCACC TGCGTTTCCT GCTCGAGTTC ATCCGGCCGG AGATCCGCCA GTATTTCGTC GAGGACGATA CCGACGAGCG CCCCTTCTCG CGTGCCCAGC GCAGCATCGT CTACCAGCGC GCCAAGGGCG AGGTCGACAG CCGTCCGTTC GGCACCGAGC TGGACGTGAA GATCGCCGGG TACGAGTGGA TCGGCCATTC GCTGGCCCCG ACGCGCATCG CGTCGTCGGA CTTCCGCGTG CTGGTGGGCG AAGGGCGGGC CAAGCCGTAT TCGATGTCGG TGTTCAACAT CTCGGCGATG AGCTTCGGGG CGTTGTCGGC CAACGCCATC CGCGCGCTGA ACCGCGGTGC GAAGCTGGGC AACTTCATCC ACGACACGGG CGAGGGCTCG ATCTCGCCGT ACCACCGGGA AGAGGGCGGC GACCTGATCT GGGAGATCGG TTCCGGCTAT TTCGGTTGCC GTGACGCCGA CGGTCGCTTC GATCCGGACC GCTTTGCCGA GCAGGCGCGT TCGCCGCAGG TGAAGATGAT CGAGGTGAAG CTGTCGCAGG GCGCCAAGCC GGGCCATGGC GGCGTGCTGC CGGCGGCCAA GGTGACAGCC GAGATTGCCG CCACGCGCGG CGTGCCGATC GGACAGGATT GCATCTCGCC GGCGACGCAT TCGGCATTCT CCACGCCGCT GGGCCTGCTG CAGTTCGTCG ACCGGCTGCG CACGCTGTCG GGCGGCAAGC CGACCGGCTT CAAGCTGTGC ATCGGCCATC CGTGGGAGTT CTTCGGCATC GTCAAGGCCA TGCTGGCGTC GGGCATCCTG CCGGACTTCA TCGTGGTGGA CGGGGCCGAG GGCGGCACGG GCGCGGCGCC GCTGGAGTTC ACGGACCACG TCGGCACGCC GCTGCAGGAA GGGCTGCTGC TGGTGCACAA CACGCTGGTC GGCACCAACC TGCGCGACAA GATCAAGATC GGCGCGTCGG GCAAGATCGT CACGGCCTTC GACGTGGCCC GTACGCTGGC GATGGGCGCC GACTGGTGCA ATGCCGCGCG CGGCTTCATG TTCGCGCTCG GCTGCATCCA GGCGCAGAAA TGCCACACCG ACCGCTGCCC GACCGGTGTC GCCACGCAGG ACAAATCGCG CCAGAAGGCC TTGGTGGTGC CGGACAAGGC CCAGCGCGTG CATCAGTACC ACGCGCACAC GCTGCACGCG CTGCTGGAGC TGACGCAGGC CGCCGGGCTG CGGCATCCGG TGGACTTCCG CGCCCACCAT ATCGTGCGGC GCGTGTCGGG CAACGAGGTG CAACTGCTGT CGACGCTGCT GAAGTATCTG GAGCCCGGTG ATCTGCTGGC CGGGCGGTAT CGCTATCAGC TCTATGAGCG CTACTGGCCG ATGGCGCAGG CCGACCGGTT CGATCCGGTG GCCGCGTGA
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Protein sequence | MLPRRYWAFA GVVLLFVVTA GFALAGRLHW ACAAIPGMLA MLGVRDLTQP RHSVLRNYPL WGHLRFLLEF IRPEIRQYFV EDDTDERPFS RAQRSIVYQR AKGEVDSRPF GTELDVKIAG YEWIGHSLAP TRIASSDFRV LVGEGRAKPY SMSVFNISAM SFGALSANAI RALNRGAKLG NFIHDTGEGS ISPYHREEGG DLIWEIGSGY FGCRDADGRF DPDRFAEQAR SPQVKMIEVK LSQGAKPGHG GVLPAAKVTA EIAATRGVPI GQDCISPATH SAFSTPLGLL QFVDRLRTLS GGKPTGFKLC IGHPWEFFGI VKAMLASGIL PDFIVVDGAE GGTGAAPLEF TDHVGTPLQE GLLLVHNTLV GTNLRDKIKI GASGKIVTAF DVARTLAMGA DWCNAARGFM FALGCIQAQK CHTDRCPTGV ATQDKSRQKA LVVPDKAQRV HQYHAHTLHA LLELTQAAGL RHPVDFRAHH IVRRVSGNEV QLLSTLLKYL EPGDLLAGRY RYQLYERYWP MAQADRFDPV AA
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