| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2702 |
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| Symbol | cspA |
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| ID | 1221549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2909040 |
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| End bp | 2909204 |
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| Gene Length | 165 bp |
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| Protein Length | 54 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637239103 |
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| Product | cold shock-like transcription regulator protein |
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| Protein accession | NP_520823 |
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| Protein GI | 17547421 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.122057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACGTGCA ACGACTCCCC TGACACGGGT GGTAACGATC TGTTCGCTCA TTTCTCCGAG
ATCCAGGGCA ATGGGGTCAA GTCACTTCAG GAAGGGCAGA AGGTTCATTA TGTTGTGGGT
GTGGGCCAGA ACGGCCCGAC TGCTACCAAG ATTGAGCCGG TCTGA
|
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| Protein sequence | MTCNDSPDTG GNDLFAHFSE IQGNGVKSLQ EGQKVHYVVG VGQNGPTATK IEPV
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