Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2672 |
Symbol | |
ID | 1221519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2881363 |
End bp | 2881842 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637239073 |
Product | hypothetical protein |
Protein accession | NP_520793 |
Protein GI | 17547391 |
COG category | [S] Function unknown |
COG ID | [COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.311364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.391613 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGCC AATCGCCCTA TCTGATGCGC GCCGCCGACA TCGCCGCGCG CGCGCATTCG TATTCGCATC CGTGGAACAG CCTGTCCGAA ATCCACGGCA CCATGATGGG CCGCCTGCTG GGCCTCAAGC GCGCCGGCGT CAACTTCGCG CGCGTGTCGC CGGGCAGGGA GTCCTCCGTC TACCACGCCC ATCAGCGGGA AGAGGAGTGG ATCTACATCC TGTCGGGCGA AGGCCAGGCC GAGATCGACG ACGGCATCTA CCGGGTGCGC GCCGGCGACT TCATGGCCTT CCCCACCGGC GTCGCCCACC ACCTGCGCAA CTGCGGCAGG GACGACCTCG TCTACCTGTG CGGCGGCGAA CACCTGAACA TCGAGATCGC CGACTTCCCG CGCCTGGGCA AGCGCATGCT GCGCCGCGGC GAGCAGGTCG ACATCGTCGA CATCCATCCC GAACGCGAAC TGACGCCCTT CGGTGCGTAG
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Protein sequence | MPSQSPYLMR AADIAARAHS YSHPWNSLSE IHGTMMGRLL GLKRAGVNFA RVSPGRESSV YHAHQREEEW IYILSGEGQA EIDDGIYRVR AGDFMAFPTG VAHHLRNCGR DDLVYLCGGE HLNIEIADFP RLGKRMLRRG EQVDIVDIHP ERELTPFGA
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