Gene RSc2672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2672 
Symbol 
ID1221519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2881363 
End bp2881842 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID637239073 
Producthypothetical protein 
Protein accessionNP_520793 
Protein GI17547391 
COG category[S] Function unknown 
COG ID[COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.311364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.391613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGCC AATCGCCCTA TCTGATGCGC GCCGCCGACA TCGCCGCGCG CGCGCATTCG 
TATTCGCATC CGTGGAACAG CCTGTCCGAA ATCCACGGCA CCATGATGGG CCGCCTGCTG
GGCCTCAAGC GCGCCGGCGT CAACTTCGCG CGCGTGTCGC CGGGCAGGGA GTCCTCCGTC
TACCACGCCC ATCAGCGGGA AGAGGAGTGG ATCTACATCC TGTCGGGCGA AGGCCAGGCC
GAGATCGACG ACGGCATCTA CCGGGTGCGC GCCGGCGACT TCATGGCCTT CCCCACCGGC
GTCGCCCACC ACCTGCGCAA CTGCGGCAGG GACGACCTCG TCTACCTGTG CGGCGGCGAA
CACCTGAACA TCGAGATCGC CGACTTCCCG CGCCTGGGCA AGCGCATGCT GCGCCGCGGC
GAGCAGGTCG ACATCGTCGA CATCCATCCC GAACGCGAAC TGACGCCCTT CGGTGCGTAG
 
Protein sequence
MPSQSPYLMR AADIAARAHS YSHPWNSLSE IHGTMMGRLL GLKRAGVNFA RVSPGRESSV 
YHAHQREEEW IYILSGEGQA EIDDGIYRVR AGDFMAFPTG VAHHLRNCGR DDLVYLCGGE
HLNIEIADFP RLGKRMLRRG EQVDIVDIHP ERELTPFGA