| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2655 |
|---|
| Symbol | |
|---|
| ID | 1221502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2859069 |
|---|
| End bp | 2859689 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637239056 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_520776 |
|---|
| Protein GI | 17547374 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC GGGCCCACGC GATCCGCACC TGGGGTGCCT GTGCGGGGGT GTTCGCGGTG
GCGGCCGCGT TTTCTTTCGT GCCGTGGCTG CATGCTGTCG GCCTGTACCA GCGCGATGCG
GTCCGTGCGG GGCAGTGGTG GCGCGTGGTC ACCGCCATGT GGGTGCACCT GGATGCCTGG
CACTGGCTGG CCGACGGCAT GGCGGCGGCG GGGCTGATCC TGCTGCTGGC ACGGGTGCTG
CGGCCGGCTG CCATCCTTGC GGTGCTGGTG GCGTGCGGCG TGCTGGTCCA GGTTGCGCTG
CTCAGCCAGC CTTCGGTGCA GTGGTACGGC GGGCTGTCCG GCGCGCTGCA CGGGCTGGCG
GCGTGGGGCG GCCTGTGTCT GCTGCGGCCC GCCGATGAAG ATGCCCGCAC CGATCGCCTG
TCGCGCTGGA TCGGCTCGCT GCTCTGCCTG GGCGTGCTGG TGAAGGTCTG GCTGGAGCAG
TCGTGGCTGT CGCCGGTTGC CTACGACCCG CACTGGGGCT TCGGCGTGGT CCGGATTGCC
CATGCGCTTG GCGCGGGCAG CGGGCTGCTG CTCTGGGTGC TGGGAGAATG GCGCGCCCAG
GGGAGGCGGG CGCGCGGCTG A
|
|---|
| Protein sequence | MSARAHAIRT WGACAGVFAV AAAFSFVPWL HAVGLYQRDA VRAGQWWRVV TAMWVHLDAW
HWLADGMAAA GLILLLARVL RPAAILAVLV ACGVLVQVAL LSQPSVQWYG GLSGALHGLA
AWGGLCLLRP ADEDARTDRL SRWIGSLLCL GVLVKVWLEQ SWLSPVAYDP HWGFGVVRIA
HALGAGSGLL LWVLGEWRAQ GRRARG
|
|---|
| |