| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2645 |
|---|
| Symbol | |
|---|
| ID | 1221492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2845349 |
|---|
| End bp | 2846326 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637239046 |
|---|
| Product | formimidoylglutamase |
|---|
| Protein accession | NP_520766 |
|---|
| Protein GI | 17547364 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
|---|
| TIGRFAM ID | [TIGR01227] formimidoylglutamase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0232342 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACACCG AGGCCGATCC GACCGTCTGG CAAGGCCGCG TCGACGCGGA AGAGGGGGCG
CTGGGCCAGC GCTGGCACCA GGTCGTGCGC AGCGCCGATG CCGCCTCGCC GCTGAACGGC
GCGGTCGCGC TGGCCGGCTT TGCCTGCGAT GCCGGCATCG CGCGCAACCA CGGCCGCGTC
GGCGCGCAGG CGGGGCCGGC CGCCATCCGC CGGATGCTCG CCAACCTGCC GGCCCGGCCC
GGCCGCGCGA TTGTCGATGC CGGCGACGTG ACCTGCCGGG GCGATGCACT GGAGGCCGCG
CAGGATGCGC TGTCCGGCGT GCTGCACGGC CTGCTCGACC GGGGCGCGTT CCCGATCGCG
CTGGGCGGCG GCCACGAGCT CGCCTGGGCG TCGTTCGGCG GATTGGCGCG GCATCTGGCG
GCCCGTTCCG CGCAGCCGCC GCGCATCGGC ATCCTGAACC TCGACGCGCA TTTCGATCTG
CGCGCGGGCG AGCGCGGCAG CTCCGGCACG CCGTTCCGCC AGATCGCCGA AGACTGCGCG
CGGCGCGGCT GGCCGTTCCG CTACGCGTGC CTGGGCATCA GCGCCTACGC CAACACCGAG
GCGCTGTTCG CGCGTGCCAG GCAGCTCGGC GTGCGCTGGC TGCGCGACGA TGAGATGGAT
CTCCTGCACC TGCCGCGGGT GCTGCAGACC GTCGACGCCT TCCTCGCCGA CGTCGATCAC
GTCTACCTGA CGATCTGCCT GGACGTGCTG CCGGCCGGCG TCGCGCCGGG CGTGAGCGCG
CCGTCCGCGC GCGGCGTGCC GATGGAGGTG ATCGAGCCCA TCGTCGATCG CGTCGCCGCG
AGCGGCAAGC TGCGGCTGGC CGACGTGGCG GAGCTGAATC CGTCGCTGGA CATCGACCAC
CGCACGGCGC GGGTCGCCGC GCGCCTCGTG GCGCGCGTCG TCGACGGGGT CGCCCCGCAG
GGAGCCGCGC ATGGCTGA
|
|---|
| Protein sequence | MHTEADPTVW QGRVDAEEGA LGQRWHQVVR SADAASPLNG AVALAGFACD AGIARNHGRV
GAQAGPAAIR RMLANLPARP GRAIVDAGDV TCRGDALEAA QDALSGVLHG LLDRGAFPIA
LGGGHELAWA SFGGLARHLA ARSAQPPRIG ILNLDAHFDL RAGERGSSGT PFRQIAEDCA
RRGWPFRYAC LGISAYANTE ALFARARQLG VRWLRDDEMD LLHLPRVLQT VDAFLADVDH
VYLTICLDVL PAGVAPGVSA PSARGVPMEV IEPIVDRVAA SGKLRLADVA ELNPSLDIDH
RTARVAARLV ARVVDGVAPQ GAAHG
|
|---|
| |