| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2530 |
|---|
| Symbol | lpxK |
|---|
| ID | 1221377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 2738152 |
|---|
| End bp | 2739201 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637238931 |
|---|
| Product | tetraacyldisaccharide 4'-kinase |
|---|
| Protein accession | NP_520651 |
|---|
| Protein GI | 17547249 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
|---|
| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.898614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.105558 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTTG CCCAGCACCG CCTAGCCAGC TTCGTCACCC GCCAATGGCA GCGGCGCGGC
TGGTTTGCGC GGATGCTGTG GCCGCTGTCG CTGCTGTTCG GGGCCGTCAG CGGGCTGCGC
CGGCGGCTGT TCCGCTGGGG CTGGCTGCGC TCGGTGCGCC TGCCAGTGCC GGTGGTGGTG
GTCGGCAATG TCACCGTCGG CGGCGCCGGC AAGACGCCGG CCGTGATCGC GCTGGCCTCG
GCGCTGGCCG ACGCGGGCCT GCGCCCCGGC ATCGTCTCGC GCGGCTACGG CGCGCAGCTC
AAGCACCCGC GCCCGGTGCG CGAGCATTCC CGCGCGGAAG ACGTCGGCGA CGAGCCCCTG
CTGATCGCCC GCGCCACCGA TCTTCCGGTC TGGGTCTACC CCGACCGTGT GCTGTGCGCG
CAGACATTGC TGGCCTCGCA CCCCGGCTGC AACGTGATCG TCTGCGACGA CGGCCTGCAG
CACTACCGCC TGCGCCGCGA CATCGAGATC GTGGTGTTCG ACCTGCGCAT GGGCGGCAAC
GGCTTCCTGC TGCCGGCCGG CCCGCTACGC GAGCCGATGA CCCGCCGCCG CGACGCCACG
CTGATCAACG ACCCCAACTA CCGCGCCACG CACGACCGCC CCGACATCTA CGGCATGCGG
CTGGACCTGC AGGATGCGTA CAACCTGGCC GATCCGGCGC TGCGCCGTCC GCTGAGCCAG
TTCGCGCGGC TGTCGGGCGA TCAGTTGCTG GCCGCCGCGG GCATCGGCAA CCCCGAGCGC
TTCTTCGCCT CGCTGCGCGC CGCCGGGCTC CAGCCGGCCA CCCTGCCGCT GCCCGACCAC
TACGACTTTG CAGACAACCC GTTCGCGGAT GCCGGCGCCG AAACCATCCT GATCACCGAA
AAGGATGCCG TAAAATGCGG CCATCTCGAC GACCCGCGCA TCTGGGTGGT GCCGACCACG
CCGGTGGTCG ATGCCGCGCT GGTCGAACAG GTCTGCCGGC GCGTGCGCGC CCTGGCCGAT
CGCTCAACTT CTCAGGCTGG CGCACAATAA
|
|---|
| Protein sequence | MPVAQHRLAS FVTRQWQRRG WFARMLWPLS LLFGAVSGLR RRLFRWGWLR SVRLPVPVVV
VGNVTVGGAG KTPAVIALAS ALADAGLRPG IVSRGYGAQL KHPRPVREHS RAEDVGDEPL
LIARATDLPV WVYPDRVLCA QTLLASHPGC NVIVCDDGLQ HYRLRRDIEI VVFDLRMGGN
GFLLPAGPLR EPMTRRRDAT LINDPNYRAT HDRPDIYGMR LDLQDAYNLA DPALRRPLSQ
FARLSGDQLL AAAGIGNPER FFASLRAAGL QPATLPLPDH YDFADNPFAD AGAETILITE
KDAVKCGHLD DPRIWVVPTT PVVDAALVEQ VCRRVRALAD RSTSQAGAQ
|
|---|
| |