| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2529 |
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| Symbol | exbD2 |
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| ID | 1221376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2737705 |
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| End bp | 2738136 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238930 |
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| Product | biopolymer transport EXBD-like transmembrane protein |
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| Protein accession | NP_520650 |
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| Protein GI | 17547248 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.161438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0831127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTTCC GCCCGCGCCA TGCCCGCGAA GAGCCGGAGA TCAACCTGAT CCCGCTGATC
GACGTGCTGC TCGTGATCCT CATCTTCCTG ATGATCACGA CCACGTATTC CCGTTACACC
GAACTGAAGG TCAACCTGCC GACCGCCGAC GCGGCGAAGG CCACCGAGCG CCCAGGCCAG
ATCGTCGTAT CGATCACGGC CAACGGCGTC TATTCGGTCG ACAAGCAGGT GCTCGACACC
CGCGACGTGA CCAGCCTGTC CGATGCCCTG CGCAGTGCCG CGGGCAGCGG CGGCGGTCCC
GAGCCGGTGG TGGTGATCAA CGCCGACGCG CAGGCCGCGC ACCAGGCTGT CGTCAACGTG
ATGGAAGCCG CCCGCGTGGC CGGCTTGTCG CACCTGACCT TCGCCACCCA GACCGGCAAC
GCCGCTCGCT GA
|
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| Protein sequence | MRFRPRHARE EPEINLIPLI DVLLVILIFL MITTTYSRYT ELKVNLPTAD AAKATERPGQ
IVVSITANGV YSVDKQVLDT RDVTSLSDAL RSAAGSGGGP EPVVVINADA QAAHQAVVNV
MEAARVAGLS HLTFATQTGN AAR
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