| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2501 |
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| Symbol | |
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| ID | 1221348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2707244 |
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| End bp | 2708902 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637238902 |
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| Product | putative gamma-glutamyltranspeptidase protein |
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| Protein accession | NP_520622 |
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| Protein GI | 17547220 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0405] Gamma-glutamyltransferase |
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| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.110727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCC TCCCTTTCCT CGCGCGCATG TCCCACCATC GCTTCGCCTG GCAGAACCCC
TATCCCACCG TGCGCATTCC GCTGTTCGCG CGCAATGTCG TATCGACCTC GCATCCGCTG
GCGGCGCAGG CGGGACTGCG CATGCTGCTG GCCGGCGGCA GCGCGGTCGA CGCGGCGATC
GCGGCGGCGG CCATGCTCAC CATCGTCGAA CCGGTGTCGT GCGGCCTGGG CAGCGATGCT
TTCGCCATCC TGTGGGACGG TGCCCGCCTG TACGGCCTCA ATGCGTCGGG CGCCGCGCCG
CGGGACTGGA GCCTCGGCTA CTTCCGCCGC AAGTACGGCG AAGACGCCCA CGGCCACCCC
AGGCGCCCCA CGCGCGGCTG GGACACGGTG ACGGTGCCGG GCGCCGTCTC GGCCTGGGCG
ACCCTGCATG AACGCTTCGG CAAGCTACCG TTCGCCGATG TGCTGGAGCC GGCGGCGGAG
ATCGCAGAAC GCGGCCACGC CATCGCCCCC ATCGTCGCGC ATAAGTGGGC GGCGGCGATC
CCCGAACTGC ACGGCCAGCC CGGCTACGCA CAGGCCTTCA TGCCGCACGG CCGCGCGCCC
GGCGTGGGCG AGAAATTCCT CCTGCGCGAT GCGGCCGCCA CGCTGCGCCG CATCGGCGAA
ACGCGCGGGC GCGACTTCTA TGAAGGCGAG CTTGCCAAGC GCATCGCCGC GCATGCGCAT
GCATGCGGCG GCGCGCTGAC CGCGCAAGAC CTGCGCGACC ACCGGCCCGA ATGGGTCACG
CCGATCCAGC AGCGCTACCG CGGCTACGAC GTGCACGAGC TTCCGCCCAA CGGCCAGGGC
ATCGCTGCGC TCGCGGCGCT GGGCATCCTC GAGCGCTTCG ACCTCGGCGC CCTGCCGGTC
GATTCGGCGG ATACGCTGCA CCTGCAGATC GAGGCGATGA AGCTGGCGTT CGCCGATCTC
TACCGCTACG TGGCCGACCC GCGCGCGATG GACGTCACGC CGGAGCAGAT GCTCGACGAC
AGCTACCTCG ACGCGCGTGC CAGGCGCATC GACATGGGCC GCGCCGGCCA TCCGGGCTTC
GGCATGCCGC GTGCCGGCGG CACCGTCTAT CTGAGCGCGG CCGACGAGCG CGGCATGATG
GTCTCGTTCA TCCAGTCCAA CTACATGGGC TTCGGGTCGG GCGTGGTGGT GCCGGGTACC
GGCATCAGCC TGCAGAACCG GGGCGTCGGC TTCTCGATGG ATGCGCGCTC GGCCAACGTG
GTGGAAGGCG GCAAGCGGCC GTTCCATACC ATCATCCCGG CGTTCCTGAC GCGGGACGGC
GCGCCGGTGA TGAGCTTCGG CGTGATGGGC GGCGACATGC AGCCGCAAGG CCATCTGCAA
ACGCTGGTGC GCATGCTCGA CTACCACCAG CAGCCGCAGG CCGCCTGCGA TGCGCCGCGC
TGGAAGGTCA ACCGCGATTT CACGCTCGAC GTGGAAGCCG CGCTGAACGC CGACACCGTC
GCCGCCCTGC AGGCGCGGGG CCACCGGCTC AAGGCGGTGG CCGATCCGTA TATGGATTTC
GGCGCGGGCC AGTTCATCTG GCGCCTGTCC GACGATGCCG ACCACGGCTA CGTGGCCGCC
AGCGACAGCC GCCGCGACGG GCACGCCGTC GGATACTGA
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| Protein sequence | MSRLPFLARM SHHRFAWQNP YPTVRIPLFA RNVVSTSHPL AAQAGLRMLL AGGSAVDAAI
AAAAMLTIVE PVSCGLGSDA FAILWDGARL YGLNASGAAP RDWSLGYFRR KYGEDAHGHP
RRPTRGWDTV TVPGAVSAWA TLHERFGKLP FADVLEPAAE IAERGHAIAP IVAHKWAAAI
PELHGQPGYA QAFMPHGRAP GVGEKFLLRD AAATLRRIGE TRGRDFYEGE LAKRIAAHAH
ACGGALTAQD LRDHRPEWVT PIQQRYRGYD VHELPPNGQG IAALAALGIL ERFDLGALPV
DSADTLHLQI EAMKLAFADL YRYVADPRAM DVTPEQMLDD SYLDARARRI DMGRAGHPGF
GMPRAGGTVY LSAADERGMM VSFIQSNYMG FGSGVVVPGT GISLQNRGVG FSMDARSANV
VEGGKRPFHT IIPAFLTRDG APVMSFGVMG GDMQPQGHLQ TLVRMLDYHQ QPQAACDAPR
WKVNRDFTLD VEAALNADTV AALQARGHRL KAVADPYMDF GAGQFIWRLS DDADHGYVAA
SDSRRDGHAV GY
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