Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2496 |
Symbol | |
ID | 1221343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2702636 |
End bp | 2703091 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637238897 |
Product | putative signal peptide protein |
Protein accession | NP_520617 |
Protein GI | 17547215 |
COG category | [R] General function prediction only |
COG ID | [COG3895] Predicted periplasmic protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.538855 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCAGAC TCCCGTGTGC CGTGGTGCTC AGTGTGGCCG TGCTAGCCGG GGTGTCCGGC GAGCCGGCGC GGGCGCAATC CTCGCCCGTG CCCGGCATGT CGTCCGAAGA CATGAACACG GCGCTCGATT TCGCCAAGGC CGGCATCGAC AAGGCCATCG ACCAGGCCCG CGCCTACGCC GCCCTGCCGA TCCGCGACCC GCGCGACGTG CGCTACGCGT GCCAGGACGG CAAGTCGCTG ACGGTGAAAT ACATGACGGT GGGCGATACG CCGCTGGCCA CCATCGTGCT CGACGGCAAG ACGCTGGTGT TCGCCAATGT CGTCTCCGGC TCGGGCGCGC GCTATGCCTC CGGCCGGTAC GTCTGGTGGA CCAAGGGCCC CACCGGCTTC CTGACCGACG AAACCCTGCC CGCCAGCCGC AGCACGGTCT ATCGCGATTG CGCCGAGGCG CGCTAG
|
Protein sequence | MRRLPCAVVL SVAVLAGVSG EPARAQSSPV PGMSSEDMNT ALDFAKAGID KAIDQARAYA ALPIRDPRDV RYACQDGKSL TVKYMTVGDT PLATIVLDGK TLVFANVVSG SGARYASGRY VWWTKGPTGF LTDETLPASR STVYRDCAEA R
|
| |