Gene RSc2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2496 
Symbol 
ID1221343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2702636 
End bp2703091 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content70% 
IMG OID637238897 
Productputative signal peptide protein 
Protein accessionNP_520617 
Protein GI17547215 
COG category[R] General function prediction only 
COG ID[COG3895] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.538855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGAC TCCCGTGTGC CGTGGTGCTC AGTGTGGCCG TGCTAGCCGG GGTGTCCGGC 
GAGCCGGCGC GGGCGCAATC CTCGCCCGTG CCCGGCATGT CGTCCGAAGA CATGAACACG
GCGCTCGATT TCGCCAAGGC CGGCATCGAC AAGGCCATCG ACCAGGCCCG CGCCTACGCC
GCCCTGCCGA TCCGCGACCC GCGCGACGTG CGCTACGCGT GCCAGGACGG CAAGTCGCTG
ACGGTGAAAT ACATGACGGT GGGCGATACG CCGCTGGCCA CCATCGTGCT CGACGGCAAG
ACGCTGGTGT TCGCCAATGT CGTCTCCGGC TCGGGCGCGC GCTATGCCTC CGGCCGGTAC
GTCTGGTGGA CCAAGGGCCC CACCGGCTTC CTGACCGACG AAACCCTGCC CGCCAGCCGC
AGCACGGTCT ATCGCGATTG CGCCGAGGCG CGCTAG
 
Protein sequence
MRRLPCAVVL SVAVLAGVSG EPARAQSSPV PGMSSEDMNT ALDFAKAGID KAIDQARAYA 
ALPIRDPRDV RYACQDGKSL TVKYMTVGDT PLATIVLDGK TLVFANVVSG SGARYASGRY
VWWTKGPTGF LTDETLPASR STVYRDCAEA R