| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2464 |
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| Symbol | clpA |
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| ID | 1221311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2672247 |
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| End bp | 2674535 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637238865 |
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| Product | ATP-dependent protease ATP-binding specificity subunit |
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| Protein accession | NP_520585 |
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| Protein GI | 17547183 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGC AAGAACTGGA AGTCAGCCTG CACATGGCGT TTGTCGAAGC CCGCCAGGCT
CGCCACGAAT TCATTACGGT GGAGCATCTG CTGCTTGCGC TGCTGGACAA TCCGACGGCG
GCGGAAGTGC TGCGCGCCTG CGCCGCCAAC ATCGAAGACC TCCGCACGCA CCTGAAGAAC
TTCATCGCCG ACAACACGCC GGTGGTGCCG GGCACGGACG AGGTGGACAC GCAGCCGACG
CTGGGCTTCC AGCGCGTGAT CCAGCGCGCC ATCATGCACG TGCAGTCGAC CTCCAACGGC
AAGAAGGAGG TGACGGGCGC CAATGTGCTG GTGGCCATCT TCGGCGAGAA GGACTCCCAC
GCGGTCTACT ACCTGCAGCA GCAGGGCGTG ACGCGGCTGG ACGTCGTCAA CTTCATCAGC
CACGGCATCC GCAAGGACCA GGCGGAGCCG GCCAAGCACG GCGACAGCAA CCCGGAGGGC
GAAGCCGGCG ACGGTAAGGA AAGCCCGCTG GAGCAGTTCA CCCAGAACCT GAACGCGCTG
GCCAAGGCCG GCAAGATCGA TCCGCTGATC GGCCGCGAGC AGGAAGTCGA GCGCGTGGTG
CAGGTGCTGT GCCGTCGCCG CAAGAACAAT CCGCTGCTGG TGGGCGAGGC GGGCGTCGGC
AAGACGGCGA TCGCCGAAGG GCTGGCATGG CGCATCACCA AGGGCGAGGT GCCGGACATC
CTGGCCCGGT CTGTGGTGTA TTCGCTCGAC ATGGGCGCGC TGCTGGCCGG CACCAAGTAT
CGTGGCGACT TCGAGCAGCG GCTCAAGGGC GTGCTGAAGT CGCTCAAGGA CAACCCGAAC
GCGATCCTGT TCATCGACGA AATCCATACG CTGATCGGCG CCGGCGCCGC ATCGGGCGGC
ACGCTGGACG CGAGCAACCT GCTCAAGCCG GCGCTGTCGT CGGGCGCGCT CAAGTGCATC
GGCGCGACCA CCTTCACCGA ATACCGGGGC ATCTTCGAGA AGGACGCGGC GCTGTCGCGG
CGCTTCCAGA AGATCGACGT GGTGGAGCCG TCCATTGACC AGACCGTGCA GATCCTGCGT
GGGCTGAAGT CGCGGTTCGA GGAGCACCAC GGCGTCAAGT ACGCGGCGTC CGCCCTGACG
GCGGCGGCTG AGCTGTCGGC GCGTTTCATT ACTGACCGCC ACCTGCCGGA CAAGGCGATC
GACGTGATCG ACGAGGCCGG CGCGGCGCAG CGCATCCTGC CGAAGTCGAA GCAGAAGAAG
ACCATCGGCA AGGGCGAGAT TGAAGACATC GTGTCGCGCA TCGCCCGTGT CCCGCCGCAA
AGCGTGTCGC AGGACGACCG CAGCAAGCTG CAGACGCTGG AGCGCGATCT GAAGTCGGTC
GTGTTCGGGC AGGACCCGGC CATCGACGCG CTGGCTTCGG CCATCAAGAT GTCGCGTGCC
GGGCTGGGCA AGACCGACAA GCCGATCGGC TCGTTCCTGT TCTCCGGCCC GACCGGCGTC
GGCAAGACCG AGGTCGCCAA GCAGCTGGCG TTCATCCTGG GCATCGAGCT GATCCGCTTC
GACATGTCGG AGTACATGGA ACGCCATGCG GTGAGCCGGC TGATCGGCGC GCCTCCGGGC
TACGTCGGGT TCGACCAGGG CGGCCTGCTG ACCGAGGCCA TCACCAAGAA GCCGCACTGC
GTGCTGCTGC TGGACGAAAT CGAGAAGGCC CACCCGGACA TCTTCAACAT CCTGCTGCAA
GTGATGGACC ACGGCTCGCT GACGGACAAC AACGGCCGCA AGGCGGATTT CCGCAACGTG
ATCATCGTCA TGACGACCAA CGCGGGCGCC GAGACGATGA ACAAGGCCAC CATCGGCTTC
ACCACGACGC GCGAGCAGGG CGACGAGATG GCCGATATCA AGCGGATGTT CACGCCGGAG
TTCCGCAACC GCCTGGATGC GACCATCAGC TTCCGCTCGC TGGACGAGGA CATCATCCTG
CGCGTGGTCG ACAAGTTCCT GATGCAGCTG GAAGAGCAAC TGCACGAGAA GAAGGTGGAC
GCCGTCTTCA CCGAGAAGCT GCGCCGCTTC CTGGCGAAGA AGGGCTTCGA CCCGCTGATG
GGCGCGCGGC CGATGCAGCG CCTGATCCAG GACATGATCC GCAAGGCGCT GGCCGACGAG
CTGCTGTTCG GCAAGCTGGT CAACGGCGGC AAGGTGGCGG TGGACCTGGA CGATGCCGAC
GCGGTCAAGC TGGAGTTCTC CGAGAACGAG GCGCCGCCCG CGCCCGCGCA GGAAGAGGCG
GAAGCCTGA
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| Protein sequence | MIAQELEVSL HMAFVEARQA RHEFITVEHL LLALLDNPTA AEVLRACAAN IEDLRTHLKN
FIADNTPVVP GTDEVDTQPT LGFQRVIQRA IMHVQSTSNG KKEVTGANVL VAIFGEKDSH
AVYYLQQQGV TRLDVVNFIS HGIRKDQAEP AKHGDSNPEG EAGDGKESPL EQFTQNLNAL
AKAGKIDPLI GREQEVERVV QVLCRRRKNN PLLVGEAGVG KTAIAEGLAW RITKGEVPDI
LARSVVYSLD MGALLAGTKY RGDFEQRLKG VLKSLKDNPN AILFIDEIHT LIGAGAASGG
TLDASNLLKP ALSSGALKCI GATTFTEYRG IFEKDAALSR RFQKIDVVEP SIDQTVQILR
GLKSRFEEHH GVKYAASALT AAAELSARFI TDRHLPDKAI DVIDEAGAAQ RILPKSKQKK
TIGKGEIEDI VSRIARVPPQ SVSQDDRSKL QTLERDLKSV VFGQDPAIDA LASAIKMSRA
GLGKTDKPIG SFLFSGPTGV GKTEVAKQLA FILGIELIRF DMSEYMERHA VSRLIGAPPG
YVGFDQGGLL TEAITKKPHC VLLLDEIEKA HPDIFNILLQ VMDHGSLTDN NGRKADFRNV
IIVMTTNAGA ETMNKATIGF TTTREQGDEM ADIKRMFTPE FRNRLDATIS FRSLDEDIIL
RVVDKFLMQL EEQLHEKKVD AVFTEKLRRF LAKKGFDPLM GARPMQRLIQ DMIRKALADE
LLFGKLVNGG KVAVDLDDAD AVKLEFSENE APPAPAQEEA EA
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