| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2447 |
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| Symbol | nadB1 |
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| ID | 1221294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2651688 |
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| End bp | 2653289 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238848 |
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| Product | L-aspartate oxidase |
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| Protein accession | NP_520568 |
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| Protein GI | 17547166 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCG ATGTTGCCGT TGTCGGCAGT GGCCTGGCGG GCCTGACCGT CGCCCTGCAC
CTCGCCGATC ACCGCCGCGT GGTCGTCATC AGCAAACGCA CACTGCCCGA AGGCGCGAGC
GACTGGGCCC AAGGCGGCAT CGCCGCGGTG CTCGACTCGA ACGACAGCCA TGACGAGCAC
GTCGACGACA CCCTGATCGC GGGCGCCGGC CTCTGCGACG AAGCGGCCAC CCGCTACATC
GTCGAAAACG GCCGCGCCGC CATCGAATGG CTGATCGGCC ATGGCGTCCC CTTCACGCGC
GACGCACGGG CCGAACTCGG CTTCCACCTG ACGCGCGAGG GCGGCCACCG GCACCGCCGC
ATCATCCACG CCGCCGATGC CACCGGGCAT GCCGTGGTGA CCACGCTGGT CGACAAGGTG
CGCGCGCATC CGAACATCAC GCTGCTGGAA GACCATTTCG CCATCGACCT GGTCACCGAC
GCCAAGCTGG GGCTGCCGGG CATGCGCTGC CACGGCCTGT ACGTGCTCGA TTGCAAGCGC
GGCGACGTCA AGACGATCAT CGCCAGCCAG ACCGTGCTGG CGACCGGCGG TGCCGGCAAG
GTCTACCTGT ACACGACCAA CCCCGACACC GCCACCGGCG ACGGCATCGC GATGGCGTGG
CGCGCGGGCT GCCGCGTGGC GAACATGGAG TTCATCCAGT TCCACCCGAC CTGCCTGTAC
CACCCGTTCG CCAAATCCTT CCTGATCAGC GAGGCGGTGC GCGGCGAAGG CGGCAAGCTG
GTCCTGCCCG ACGGCACGCG CTTCATGCCC GCCCACGACG AGCGGGCCGA ACTGGCCCCG
CGCGACATCG TGGCCCGCGC CATCGACTTC GAGATGAAAA AGCGCGGCCT GGACTGCGTC
TACCTCGACA TCAGCCACCA GAGCCCCGCC TTCATTCAGG AACACTTCCC GACCATCCTC
GCCCGATGCC TGGAACTGGG CATCGACATC ACGCGCCAGC CGATCCCGGT GGTGCCGGCC
GCGCACTACA CCTGCGGCGG CGTGGTGACC GACCAGCTCG GCCGCACCGA CATCGCGGGC
CTGTACGCGG TAGGCGAAAC GGCCTACACC GGCCTGCACG GCGCCAACCG GCTGGCCAGC
AATTCGCTGC TGGAATGCAT GGTGATCGGG CGCGGCGCGG CGCAGGACAT CCTGGGCCAG
CCTGCCACGG CGCCGACCCC GACCCCGATC CCGGCCTGGG ACGAAAGCCG CGTGACGGAC
GCCGACGAGG AAGTCGTCGT CTCGCACAAC TGGGACGAAC TGCGCCGCAT GATGTGGAAT
TACGTCGGCA TCGTGCGCAC CAACAAGCGA CTGGAACGCG CACAGCACCG CATCGCCCTG
CTGCGCGAAG AGATCGCAGA GTACTACGCC AACTTCCGCG TCAGCCACGA CCTGCTGGAG
CTGCGCAATC TGGTGGAGGC GGCCTCGTTG ATCGTCGACA GCGCGCTGTC ACGCCACGAA
AGCCGCGGCC TGCATTTCTC GCGCGACTAC CCGCAGACCC TGCCCAAGGC GCTGCCGACG
GTGATGCAAC CCGCGCATCG GCGCACCTCG CGCAAGCACT GA
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| Protein sequence | MNFDVAVVGS GLAGLTVALH LADHRRVVVI SKRTLPEGAS DWAQGGIAAV LDSNDSHDEH
VDDTLIAGAG LCDEAATRYI VENGRAAIEW LIGHGVPFTR DARAELGFHL TREGGHRHRR
IIHAADATGH AVVTTLVDKV RAHPNITLLE DHFAIDLVTD AKLGLPGMRC HGLYVLDCKR
GDVKTIIASQ TVLATGGAGK VYLYTTNPDT ATGDGIAMAW RAGCRVANME FIQFHPTCLY
HPFAKSFLIS EAVRGEGGKL VLPDGTRFMP AHDERAELAP RDIVARAIDF EMKKRGLDCV
YLDISHQSPA FIQEHFPTIL ARCLELGIDI TRQPIPVVPA AHYTCGGVVT DQLGRTDIAG
LYAVGETAYT GLHGANRLAS NSLLECMVIG RGAAQDILGQ PATAPTPTPI PAWDESRVTD
ADEEVVVSHN WDELRRMMWN YVGIVRTNKR LERAQHRIAL LREEIAEYYA NFRVSHDLLE
LRNLVEAASL IVDSALSRHE SRGLHFSRDY PQTLPKALPT VMQPAHRRTS RKH
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