| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2428 |
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| Symbol | |
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| ID | 1221274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2632659 |
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| End bp | 2633828 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637238828 |
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| Product | amino acid-binding periplasmic (PBP) ABC transporter protein |
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| Protein accession | NP_520549 |
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| Protein GI | 17547147 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC GACGACGCCT GCTGCACGGC CTGGCGCTAC TGGCCAGCGC CGCCGCCATC
GCCCTGCCCG CCCGCGCCGA CCTGCGCATT GGCGTGGTGC TGTCGACCAC CGGCCCCGCC
GCCGCCATCG GCATCCCGAC ACGGAACACC GTGCAGATGT GGCCGACGAC GCTGGGCGGC
CAGCGCGCAC AGGTCATCGT GCTGGACGAC GCCTCCGACC CCGCGCAAGC GGTGCGCAAC
GTGCGCCGGC TGATCGCCGA GGACCATGTC GATGCGATTG TCGGTCCGAC CATCGCGCCG
ACCGCGCTGG CCTCGCTCGA TGCGGTGACC GAAGGGCAGA CGCCGATGAT CGCACTGGCG
GCCTCGGCCT CCATCGTCGA GCCGCAGGAC ACCAAGCGGC ACTGGGCCTT CAAGATGCCG
CAGAACGACT CGCACATGGC CACGCTGGTC ACGCAGCACA TGGCCGACAG CGGCGTGCGC
ACGGTCGGCT TCATCGGCTT TGCCGACGCC TACGGCGAGA GCTGGTGGCG CGAGTTCTCG
AAGCTGGCCG AAGTGCGCGG GCTGCAGGTG GTCGGCAGCG AGCGCTTCGC CCGCACCGAC
GCCAGCGTCA CGGGCCAGAT CCTCAAGCTG ATGGCCGCCC GGCCCGATGC CATCCTGATC
GCCGGCGCCG GCACGCCGGC CGCGCTGCCG CAGCGCACCC TGGTCGAGCG CGGCTACAAG
GGCCGCCTCT ACCAGACCCA CGGCATCGCC AGCACCGAAT TCCTGAAGGT GGGCGGCAAG
GACGTGGAGG GCACGCTGTT TCCCACCGGG CCGGTGGTGG TCGCGCGCGA ATTGCCGGCC
AGCCACCCGG TGAGGCAGGT CGCCGTCGCG TTCGTCGAGC GCTATGAGGC CCGGTACGGC
CCGAACACCG TCACCCAGTT CGCCGGCGAT GCCTGGGGCG CATGGCAGCT GCTCGACAAC
GCCGCCGAGC GCGCCCTGAA GACCCGGGCG CAGCCCGGCA CGCCCGCCTT CCGCGCCGCC
CTGCGCGATG CGCTGGAAAC CACGCACGGC CTGACCGTGC CCAACGGCGT GCTGAACCTG
AATGCCCGCG ATCACCAGGG CTTCGACCAG CGCTCGCGCG TGATGGGCAT CATCCGGGAC
GGACGCTTCG CCTACGCGGG CCCACGCTGA
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| Protein sequence | MTTRRRLLHG LALLASAAAI ALPARADLRI GVVLSTTGPA AAIGIPTRNT VQMWPTTLGG
QRAQVIVLDD ASDPAQAVRN VRRLIAEDHV DAIVGPTIAP TALASLDAVT EGQTPMIALA
ASASIVEPQD TKRHWAFKMP QNDSHMATLV TQHMADSGVR TVGFIGFADA YGESWWREFS
KLAEVRGLQV VGSERFARTD ASVTGQILKL MAARPDAILI AGAGTPAALP QRTLVERGYK
GRLYQTHGIA STEFLKVGGK DVEGTLFPTG PVVVARELPA SHPVRQVAVA FVERYEARYG
PNTVTQFAGD AWGAWQLLDN AAERALKTRA QPGTPAFRAA LRDALETTHG LTVPNGVLNL
NARDHQGFDQ RSRVMGIIRD GRFAYAGPR
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