Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2411 |
Symbol | |
ID | 1221257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2615716 |
End bp | 2616651 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637238811 |
Product | transcription regulator protein |
Protein accession | NP_520532 |
Protein GI | 17547130 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGC GCCAGCTCCG CTACTTCGTG ACCGTTGCCG AGGAACTGCA CTTCGGCCGC GCCGCCGCGC GCCTGGCGAT GACGCAGCCG CCGCTGTCGC AGCAGATCCG CGCGCTGGAG GAGGAGCTGG GCGTCGCGCT GTTCCACCGC ACGCAGCGCT CGGTGGCGCT GACGCCGGTG GGGGCACGCT GGCTGGTGGA GGTGCGGCGC GTCCTGGCGG AGGCGGGCGC GTTGCCGGCG CTGGCGCAGC GGCTGGCGCG CGGCGAGGTG GGGTCGCTGT CGCTGGCCTT TGTCAGCACG GCCGACTACG GCATCCTGCC CGCCATGCTG CGCCATTTCC GCGATGCCCG GCCCGACGTG CAGGTGCAAT TGCGCGAAGC CACCAGCGAC GTGCAGATCG AGGCACTGCT GGCCGACGAG ATCGACGCCG GCGTAGTGAT CGCGCATCAC ATCGGCTCCG TGCCGGGCGA ACTGGAATAC CGGCCGCTGG CGCGCGAGGG GCTGGTGCTG GCCGTGCCCG CGGCGCGCGC GGCGCAATGG GGCGCGCGGC CCGGCCGGCC GATCGCGCTG GCCGACGTGG CCGCCGAGCC GCTGATTATT TTCCCGCGCC GTTCCGCGCC GGCGCTGTAC GACATCATTA CCGGCTATCA TGCCGCGCAC GGCGGCGCCC AGGAGGCGTC CGCGCGCATC GCCCAGGAGG CGATCCAGAT GCAGACCATC GTCAGCCTCG TCTCCGCCGA GATGGGCGTG GCCCTGGTGC CCGCATCGCT GTGCAACCTG CAGCGGACCG GCGTGGTCTA TCTCGAACTG GCCGAGCCGA GCCCGGTCAT CGAGACCGGG CTGGTCTGGC GGCGCGACGC GGTATCGCCC GTGGTGCCGT GGTTCGTGGC CAGCGCCGAG GCCGTGGCCC GCTTGCATGA CAACCCCCAA CCCTGA
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Protein sequence | MDLRQLRYFV TVAEELHFGR AAARLAMTQP PLSQQIRALE EELGVALFHR TQRSVALTPV GARWLVEVRR VLAEAGALPA LAQRLARGEV GSLSLAFVST ADYGILPAML RHFRDARPDV QVQLREATSD VQIEALLADE IDAGVVIAHH IGSVPGELEY RPLAREGLVL AVPAARAAQW GARPGRPIAL ADVAAEPLII FPRRSAPALY DIITGYHAAH GGAQEASARI AQEAIQMQTI VSLVSAEMGV ALVPASLCNL QRTGVVYLEL AEPSPVIETG LVWRRDAVSP VVPWFVASAE AVARLHDNPQ P
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