Gene RSc2411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2411 
Symbol 
ID1221257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2615716 
End bp2616651 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content73% 
IMG OID637238811 
Producttranscription regulator protein 
Protein accessionNP_520532 
Protein GI17547130 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGC GCCAGCTCCG CTACTTCGTG ACCGTTGCCG AGGAACTGCA CTTCGGCCGC 
GCCGCCGCGC GCCTGGCGAT GACGCAGCCG CCGCTGTCGC AGCAGATCCG CGCGCTGGAG
GAGGAGCTGG GCGTCGCGCT GTTCCACCGC ACGCAGCGCT CGGTGGCGCT GACGCCGGTG
GGGGCACGCT GGCTGGTGGA GGTGCGGCGC GTCCTGGCGG AGGCGGGCGC GTTGCCGGCG
CTGGCGCAGC GGCTGGCGCG CGGCGAGGTG GGGTCGCTGT CGCTGGCCTT TGTCAGCACG
GCCGACTACG GCATCCTGCC CGCCATGCTG CGCCATTTCC GCGATGCCCG GCCCGACGTG
CAGGTGCAAT TGCGCGAAGC CACCAGCGAC GTGCAGATCG AGGCACTGCT GGCCGACGAG
ATCGACGCCG GCGTAGTGAT CGCGCATCAC ATCGGCTCCG TGCCGGGCGA ACTGGAATAC
CGGCCGCTGG CGCGCGAGGG GCTGGTGCTG GCCGTGCCCG CGGCGCGCGC GGCGCAATGG
GGCGCGCGGC CCGGCCGGCC GATCGCGCTG GCCGACGTGG CCGCCGAGCC GCTGATTATT
TTCCCGCGCC GTTCCGCGCC GGCGCTGTAC GACATCATTA CCGGCTATCA TGCCGCGCAC
GGCGGCGCCC AGGAGGCGTC CGCGCGCATC GCCCAGGAGG CGATCCAGAT GCAGACCATC
GTCAGCCTCG TCTCCGCCGA GATGGGCGTG GCCCTGGTGC CCGCATCGCT GTGCAACCTG
CAGCGGACCG GCGTGGTCTA TCTCGAACTG GCCGAGCCGA GCCCGGTCAT CGAGACCGGG
CTGGTCTGGC GGCGCGACGC GGTATCGCCC GTGGTGCCGT GGTTCGTGGC CAGCGCCGAG
GCCGTGGCCC GCTTGCATGA CAACCCCCAA CCCTGA
 
Protein sequence
MDLRQLRYFV TVAEELHFGR AAARLAMTQP PLSQQIRALE EELGVALFHR TQRSVALTPV 
GARWLVEVRR VLAEAGALPA LAQRLARGEV GSLSLAFVST ADYGILPAML RHFRDARPDV
QVQLREATSD VQIEALLADE IDAGVVIAHH IGSVPGELEY RPLAREGLVL AVPAARAAQW
GARPGRPIAL ADVAAEPLII FPRRSAPALY DIITGYHAAH GGAQEASARI AQEAIQMQTI
VSLVSAEMGV ALVPASLCNL QRTGVVYLEL AEPSPVIETG LVWRRDAVSP VVPWFVASAE
AVARLHDNPQ P